Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 LINC01529-204ENST00000636474 1715 ntBASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 FP325331.1-202ENST00000623531 1380 ntBASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.13■■□□□ 1.29
PCDH18Q9HCL0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.12■■□□□ 1.29
PCDH18Q9HCL0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 C17orf82-201ENST00000623772 1530 ntBASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.11■■□□□ 1.29
PCDH18Q9HCL0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH18Q9HCL0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH18Q9HCL0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 DUX4L4-201ENST00000566884 1269 ntBASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 AL117332.1-201ENST00000622628 974 ntBASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PCDH18Q9HCL0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
PCDH18Q9HCL0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH18Q9HCL0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.08■■□□□ 1.28
PCDH18Q9HCL0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
PCDH18Q9HCL0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
PCDH18Q9HCL0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH18Q9HCL0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH18Q9HCL0 AL356441.2-201ENST00000443009 864 ntBASIC23.06■■□□□ 1.28
PCDH18Q9HCL0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH18Q9HCL0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 MIR3621-201ENST00000580529 85 ntBASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDH18Q9HCL0 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 AL356740.2-201ENST00000601559 647 ntBASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDH18Q9HCL0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDH18Q9HCL0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms