Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
TRPM3Q9HCF6 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC30.57■■■□□ 2.48
TRPM3Q9HCF6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.56■■■□□ 2.48
TRPM3Q9HCF6 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 CDCA4P2-201ENST00000441182 718 ntBASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
TRPM3Q9HCF6 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.54■■■□□ 2.48
TRPM3Q9HCF6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.53■■■□□ 2.48
TRPM3Q9HCF6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
TRPM3Q9HCF6 DUX4L4-201ENST00000566884 1269 ntBASIC30.52■■■□□ 2.48
TRPM3Q9HCF6 AC104771.1-201ENST00000603335 964 ntBASIC30.52■■■□□ 2.48
TRPM3Q9HCF6 AC080038.1-201ENST00000611274 1154 ntBASIC30.52■■■□□ 2.48
TRPM3Q9HCF6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TRPM3Q9HCF6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
TRPM3Q9HCF6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
TRPM3Q9HCF6 ABHD17AP1-201ENST00000358206 933 ntBASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 AC016769.1-201ENST00000409132 1010 ntBASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 AC105233.4-201ENST00000642045 216 ntBASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
TRPM3Q9HCF6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 AC137761.2-201ENST00000561729 223 ntBASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 AC145350.3-201ENST00000569033 163 ntBASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.5■■■□□ 2.47
TRPM3Q9HCF6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 AC145676.1-201ENST00000514988 2004 ntBASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
TRPM3Q9HCF6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
TRPM3Q9HCF6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
TRPM3Q9HCF6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms