Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 AC010542.4-201ENST00000563151 1910 ntBASIC24.46■■□□□ 1.51
KCNF1Q9H3M0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
KCNF1Q9H3M0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
KCNF1Q9H3M0 AC087742.1-201ENST00000575880 1738 ntBASIC24.46■■□□□ 1.51
KCNF1Q9H3M0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC24.46■■□□□ 1.51
KCNF1Q9H3M0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
KCNF1Q9H3M0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 ECEL1P2-201ENST00000461596 1295 ntBASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 MIR3648-2-201ENST00000581792 180 ntBASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 MIR3648-1-201ENST00000615959 180 ntBASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
KCNF1Q9H3M0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 AC131274.2-201ENST00000580697 1507 ntBASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
KCNF1Q9H3M0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
KCNF1Q9H3M0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNF1Q9H3M0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNF1Q9H3M0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
KCNF1Q9H3M0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
KCNF1Q9H3M0 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
KCNF1Q9H3M0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 AC007029.1-201ENST00000604183 313 ntBASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.4■■□□□ 1.5
KCNF1Q9H3M0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
KCNF1Q9H3M0 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
KCNF1Q9H3M0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.39■■□□□ 1.5
KCNF1Q9H3M0 AL121603.2-201ENST00000557373 2117 ntBASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
KCNF1Q9H3M0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
KCNF1Q9H3M0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
KCNF1Q9H3M0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
KCNF1Q9H3M0 AL353803.4-201ENST00000565882 1934 ntBASIC24.36■■□□□ 1.49
KCNF1Q9H3M0 RPS2P35-201ENST00000443417 897 ntBASIC24.36■■□□□ 1.49
KCNF1Q9H3M0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.36■■□□□ 1.49
KCNF1Q9H3M0 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
KCNF1Q9H3M0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms