Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 DUX4L4-201ENST00000566884 1269 ntBASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 AC126544.1-201ENST00000580842 1059 ntBASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
OPN3Q9H1Y3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 LINC01529-204ENST00000636474 1715 ntBASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
OPN3Q9H1Y3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 AC026271.2-201ENST00000428091 497 ntBASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 AL499627.2-201ENST00000606283 725 ntBASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
OPN3Q9H1Y3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 IRS3P-201ENST00000223076 1006 ntBASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
OPN3Q9H1Y3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
OPN3Q9H1Y3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
OPN3Q9H1Y3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN3Q9H1Y3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
OPN3Q9H1Y3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.64■□□□□ 0.73
OPN3Q9H1Y3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 AC079630.1-202ENST00000618127 1840 ntBASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 AC010525.1-201ENST00000585559 441 ntBASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.63■□□□□ 0.73
OPN3Q9H1Y3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN3Q9H1Y3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
OPN3Q9H1Y3 TSPY26P-201ENST00000476365 1326 ntBASIC19.62■□□□□ 0.73
OPN3Q9H1Y3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.62■□□□□ 0.73
OPN3Q9H1Y3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
OPN3Q9H1Y3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms