Protein–RNA interactions for Protein: Q9BWJ5

SF3B5, Splicing factor 3B subunit 5, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5Q9BWJ5 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.84■□□□□ 0.77
SF3B5Q9BWJ5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.83■□□□□ 0.77
SF3B5Q9BWJ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3B5Q9BWJ5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3B5Q9BWJ5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.83■□□□□ 0.76
SF3B5Q9BWJ5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SF3B5Q9BWJ5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
SF3B5Q9BWJ5 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SF3B5Q9BWJ5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 AL138724.1-201ENST00000606771 1088 ntBASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SF3B5Q9BWJ5 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SF3B5Q9BWJ5 SYT6-210ENST00000641643 1587 ntBASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 AC006455.2-201ENST00000429931 906 ntBASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SF3B5Q9BWJ5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 pRNA.6-201ENST00000610482 90 ntBASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 pRNA.5-201ENST00000612139 90 ntBASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 pRNA.11-201ENST00000618423 90 ntBASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 pRNA.13-201ENST00000619112 90 ntBASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SF3B5Q9BWJ5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 MIR3181-201ENST00000578512 73 ntBASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.77■□□□□ 0.76
SF3B5Q9BWJ5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SF3B5Q9BWJ5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms