Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CPPED1Q9BRF8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CPPED1Q9BRF8 AC010980.1-201ENST00000587192 1142 ntBASIC21.02■□□□□ 0.96
CPPED1Q9BRF8 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.02■□□□□ 0.96
CPPED1Q9BRF8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
CPPED1Q9BRF8 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.02■□□□□ 0.96
CPPED1Q9BRF8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CPPED1Q9BRF8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CPPED1Q9BRF8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CPPED1Q9BRF8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21■□□□□ 0.95
CPPED1Q9BRF8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
CPPED1Q9BRF8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21■□□□□ 0.95
CPPED1Q9BRF8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21■□□□□ 0.95
CPPED1Q9BRF8 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CPPED1Q9BRF8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CPPED1Q9BRF8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CPPED1Q9BRF8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 SNX5-217ENST00000606557 1087 ntBASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
CPPED1Q9BRF8 AC144652.1-201ENST00000609974 1624 ntBASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 AC087742.1-201ENST00000575880 1738 ntBASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 AC080038.3-201ENST00000623346 1952 ntBASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 AC092053.2-201ENST00000640557 1818 ntBASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CPPED1Q9BRF8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 TSPY13P-201ENST00000338964 914 ntBASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.95■□□□□ 0.94
CPPED1Q9BRF8 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms