Protein–RNA interactions for Protein: Q9BQJ4

TMEM47, Transmembrane protein 47, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47Q9BQJ4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.09■■□□□ 1.77
TMEM47Q9BQJ4 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEM47Q9BQJ4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 AL353803.4-201ENST00000565882 1934 ntBASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
TMEM47Q9BQJ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 AC008764.7-201ENST00000593779 1081 ntBASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 ANOS2P-203ENST00000472227 1816 ntBASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.06■■□□□ 1.76
TMEM47Q9BQJ4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.05■■□□□ 1.76
TMEM47Q9BQJ4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 HYI-206ENST00000372434 1025 ntTSL 5 BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEM47Q9BQJ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 AC091305.1-201ENST00000479476 895 ntBASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
TMEM47Q9BQJ4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 AC099791.1-201ENST00000416440 715 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 BX842568.3-201ENST00000418104 571 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 ZNRF2P3-201ENST00000424200 374 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 AC027682.1-201ENST00000562846 899 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 AC233992.3-201ENST00000607491 485 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 CA15P2-201ENST00000611168 834 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 RASA4CP-201ENST00000424092 1398 ntBASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TMEM47Q9BQJ4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM47Q9BQJ4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM47Q9BQJ4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM47Q9BQJ4 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
TMEM47Q9BQJ4 SLC47A1P1-202ENST00000449666 945 ntBASIC26.01■■□□□ 1.75
TMEM47Q9BQJ4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
TMEM47Q9BQJ4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
TMEM47Q9BQJ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.99■■□□□ 1.75
TMEM47Q9BQJ4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms