Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SMC6Q96SB8 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 AC087393.1-201ENST00000582896 145 ntBASIC22.55■■□□□ 1.2
SMC6Q96SB8 U85056.1-201ENST00000616429 682 ntBASIC22.55■■□□□ 1.2
SMC6Q96SB8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.55■■□□□ 1.2
SMC6Q96SB8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SMC6Q96SB8 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.54■■□□□ 1.2
SMC6Q96SB8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC6Q96SB8 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC6Q96SB8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
SMC6Q96SB8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SMC6Q96SB8 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SMC6Q96SB8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.54■■□□□ 1.2
SMC6Q96SB8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SMC6Q96SB8 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC22.53■■□□□ 1.2
SMC6Q96SB8 AC131274.2-201ENST00000580697 1507 ntBASIC22.53■■□□□ 1.2
SMC6Q96SB8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC6Q96SB8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.53■■□□□ 1.2
SMC6Q96SB8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SMC6Q96SB8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC6Q96SB8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SMC6Q96SB8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SMC6Q96SB8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC6Q96SB8 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC6Q96SB8 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.52■■□□□ 1.2
SMC6Q96SB8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC6Q96SB8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SMC6Q96SB8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
SMC6Q96SB8 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SMC6Q96SB8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SMC6Q96SB8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
SMC6Q96SB8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC22.51■■□□□ 1.19
SMC6Q96SB8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC6Q96SB8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC6Q96SB8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.51■■□□□ 1.19
SMC6Q96SB8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.51■■□□□ 1.19
SMC6Q96SB8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SMC6Q96SB8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
SMC6Q96SB8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SMC6Q96SB8 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC6Q96SB8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC6Q96SB8 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
SMC6Q96SB8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SMC6Q96SB8 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC6Q96SB8 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
SMC6Q96SB8 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.49■■□□□ 1.19
SMC6Q96SB8 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SMC6Q96SB8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.49■■□□□ 1.19
SMC6Q96SB8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC22.48■■□□□ 1.19
SMC6Q96SB8 AC079630.1-202ENST00000618127 1840 ntBASIC22.48■■□□□ 1.19
SMC6Q96SB8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC22.48■■□□□ 1.19
SMC6Q96SB8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC6Q96SB8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.48■■□□□ 1.19
SMC6Q96SB8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SMC6Q96SB8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC6Q96SB8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC6Q96SB8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
SMC6Q96SB8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms