Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
NEK1Q96PY6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NEK1Q96PY6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NEK1Q96PY6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
NEK1Q96PY6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
NEK1Q96PY6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NEK1Q96PY6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.45■■□□□ 1.82
NEK1Q96PY6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.44■■□□□ 1.82
NEK1Q96PY6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
NEK1Q96PY6 AL117332.1-201ENST00000622628 974 ntBASIC26.44■■□□□ 1.82
NEK1Q96PY6 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
NEK1Q96PY6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC26.44■■□□□ 1.82
NEK1Q96PY6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NEK1Q96PY6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
NEK1Q96PY6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 AL356441.2-201ENST00000443009 864 ntBASIC26.43■■□□□ 1.82
NEK1Q96PY6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NEK1Q96PY6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
NEK1Q96PY6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NEK1Q96PY6 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.43■■□□□ 1.82
NEK1Q96PY6 C1orf229-201ENST00000623686 2258 ntBASIC26.42■■□□□ 1.82
NEK1Q96PY6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NEK1Q96PY6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
NEK1Q96PY6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.42■■□□□ 1.82
NEK1Q96PY6 DUX4L4-201ENST00000566884 1269 ntBASIC26.42■■□□□ 1.82
NEK1Q96PY6 MIR3621-201ENST00000580529 85 ntBASIC26.42■■□□□ 1.82
NEK1Q96PY6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
NEK1Q96PY6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC26.42■■□□□ 1.82
NEK1Q96PY6 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
NEK1Q96PY6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.41■■□□□ 1.82
NEK1Q96PY6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
NEK1Q96PY6 AL356740.2-201ENST00000601559 647 ntBASIC26.41■■□□□ 1.82
NEK1Q96PY6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC26.41■■□□□ 1.82
NEK1Q96PY6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
NEK1Q96PY6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NEK1Q96PY6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
NEK1Q96PY6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.4■■□□□ 1.82
NEK1Q96PY6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.4■■□□□ 1.82
NEK1Q96PY6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
NEK1Q96PY6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
NEK1Q96PY6 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
NEK1Q96PY6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
NEK1Q96PY6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC26.39■■□□□ 1.82
NEK1Q96PY6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.39■■□□□ 1.81
NEK1Q96PY6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.38■■□□□ 1.81
NEK1Q96PY6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
NEK1Q96PY6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NEK1Q96PY6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
NEK1Q96PY6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
NEK1Q96PY6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC26.38■■□□□ 1.81
NEK1Q96PY6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC26.37■■□□□ 1.81
NEK1Q96PY6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.37■■□□□ 1.81
NEK1Q96PY6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC26.37■■□□□ 1.81
NEK1Q96PY6 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NEK1Q96PY6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
NEK1Q96PY6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
NEK1Q96PY6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
NEK1Q96PY6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.36■■□□□ 1.81
NEK1Q96PY6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.36■■□□□ 1.81
NEK1Q96PY6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK1Q96PY6 RASSF1-AS1-201ENST00000629828 790 ntBASIC26.36■■□□□ 1.81
NEK1Q96PY6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.36■■□□□ 1.81
NEK1Q96PY6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
NEK1Q96PY6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
NEK1Q96PY6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC26.35■■□□□ 1.81
NEK1Q96PY6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
NEK1Q96PY6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NEK1Q96PY6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
NEK1Q96PY6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.35■■□□□ 1.81
NEK1Q96PY6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK1Q96PY6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NEK1Q96PY6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK1Q96PY6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK1Q96PY6 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NEK1Q96PY6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
NEK1Q96PY6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC26.34■■□□□ 1.81
NEK1Q96PY6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
NEK1Q96PY6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC26.34■■□□□ 1.81
NEK1Q96PY6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NEK1Q96PY6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.81
NEK1Q96PY6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
NEK1Q96PY6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
NEK1Q96PY6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
NEK1Q96PY6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
NEK1Q96PY6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms