Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RITA1Q96K30 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.94■□□□□ 0.46
RITA1Q96K30 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RITA1Q96K30 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.93■□□□□ 0.46
RITA1Q96K30 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RITA1Q96K30 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.93■□□□□ 0.46
RITA1Q96K30 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RITA1Q96K30 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.93■□□□□ 0.46
RITA1Q96K30 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RITA1Q96K30 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RITA1Q96K30 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RITA1Q96K30 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RITA1Q96K30 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RITA1Q96K30 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RITA1Q96K30 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.92■□□□□ 0.46
RITA1Q96K30 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RITA1Q96K30 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
RITA1Q96K30 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.92■□□□□ 0.46
RITA1Q96K30 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RITA1Q96K30 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RITA1Q96K30 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.92■□□□□ 0.46
RITA1Q96K30 MIR3621-201ENST00000580529 85 ntBASIC17.92■□□□□ 0.46
RITA1Q96K30 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RITA1Q96K30 C17orf82-201ENST00000623772 1530 ntBASIC17.92■□□□□ 0.46
RITA1Q96K30 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC17.91■□□□□ 0.46
RITA1Q96K30 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.91■□□□□ 0.46
RITA1Q96K30 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RITA1Q96K30 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RITA1Q96K30 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RITA1Q96K30 AL356740.2-201ENST00000601559 647 ntBASIC17.91■□□□□ 0.46
RITA1Q96K30 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.91■□□□□ 0.46
RITA1Q96K30 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.91■□□□□ 0.46
RITA1Q96K30 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RITA1Q96K30 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.91■□□□□ 0.46
RITA1Q96K30 LINC01529-204ENST00000636474 1715 ntBASIC17.91■□□□□ 0.46
RITA1Q96K30 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RITA1Q96K30 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RITA1Q96K30 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.9■□□□□ 0.46
RITA1Q96K30 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RITA1Q96K30 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
RITA1Q96K30 FP325331.1-202ENST00000623531 1380 ntBASIC17.9■□□□□ 0.46
RITA1Q96K30 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
RITA1Q96K30 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RITA1Q96K30 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RITA1Q96K30 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RITA1Q96K30 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.89■□□□□ 0.45
RITA1Q96K30 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
RITA1Q96K30 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RITA1Q96K30 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
RITA1Q96K30 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
RITA1Q96K30 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
RITA1Q96K30 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RITA1Q96K30 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.88■□□□□ 0.45
RITA1Q96K30 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RITA1Q96K30 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RITA1Q96K30 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.87■□□□□ 0.45
RITA1Q96K30 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
RITA1Q96K30 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.87■□□□□ 0.45
RITA1Q96K30 AC012676.1-201ENST00000574705 1949 ntBASIC17.87■□□□□ 0.45
RITA1Q96K30 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RITA1Q96K30 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.87■□□□□ 0.45
RITA1Q96K30 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.87■□□□□ 0.45
RITA1Q96K30 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.87■□□□□ 0.45
RITA1Q96K30 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.86■□□□□ 0.45
RITA1Q96K30 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
RITA1Q96K30 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RITA1Q96K30 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RITA1Q96K30 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms