Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.27■□□□□ 0.67
CPNE2Q96FN4 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE2Q96FN4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CPNE2Q96FN4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 MIR4508-201ENST00000584178 70 ntBASIC19.26■□□□□ 0.67
CPNE2Q96FN4 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CPNE2Q96FN4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 AC010980.1-201ENST00000587192 1142 ntBASIC19.25■□□□□ 0.67
CPNE2Q96FN4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.25■□□□□ 0.67
CPNE2Q96FN4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CPNE2Q96FN4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.24■□□□□ 0.67
CPNE2Q96FN4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
CPNE2Q96FN4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CPNE2Q96FN4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 YBX1P4-201ENST00000392794 808 ntBASIC19.22■□□□□ 0.67
CPNE2Q96FN4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 AC012354.3-201ENST00000623734 483 ntBASIC19.22■□□□□ 0.67
CPNE2Q96FN4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.22■□□□□ 0.67
CPNE2Q96FN4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.21■□□□□ 0.67
CPNE2Q96FN4 C1orf229-201ENST00000623686 2258 ntBASIC19.21■□□□□ 0.67
CPNE2Q96FN4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
CPNE2Q96FN4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms