Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM11Q96F44 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM11Q96F44 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM11Q96F44 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.58■■□□□ 1.37
TRIM11Q96F44 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TRIM11Q96F44 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TRIM11Q96F44 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
TRIM11Q96F44 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.58■■□□□ 1.36
TRIM11Q96F44 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.57■■□□□ 1.36
TRIM11Q96F44 AC010997.5-201ENST00000609182 354 ntBASIC23.57■■□□□ 1.36
TRIM11Q96F44 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
TRIM11Q96F44 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TRIM11Q96F44 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
TRIM11Q96F44 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
TRIM11Q96F44 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 AL451085.2-201ENST00000605085 799 ntBASIC23.55■■□□□ 1.36
TRIM11Q96F44 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
TRIM11Q96F44 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.55■■□□□ 1.36
TRIM11Q96F44 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM11Q96F44 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM11Q96F44 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM11Q96F44 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.54■■□□□ 1.36
TRIM11Q96F44 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
TRIM11Q96F44 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC23.54■■□□□ 1.36
TRIM11Q96F44 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM11Q96F44 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.53■■□□□ 1.36
TRIM11Q96F44 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
TRIM11Q96F44 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.53■■□□□ 1.36
TRIM11Q96F44 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 TSPY9P-201ENST00000440215 945 ntBASIC23.52■■□□□ 1.36
TRIM11Q96F44 TSPY11P-201ENST00000442607 1045 ntBASIC23.52■■□□□ 1.36
TRIM11Q96F44 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
TRIM11Q96F44 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.52■■□□□ 1.36
TRIM11Q96F44 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
TRIM11Q96F44 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
TRIM11Q96F44 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.35
TRIM11Q96F44 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.51■■□□□ 1.35
TRIM11Q96F44 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 GUSBP5-202ENST00000510805 1989 ntBASIC23.51■■□□□ 1.35
TRIM11Q96F44 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM11Q96F44 DUX4L4-201ENST00000566884 1269 ntBASIC23.51■■□□□ 1.35
TRIM11Q96F44 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.51■■□□□ 1.35
TRIM11Q96F44 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
TRIM11Q96F44 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.51■■□□□ 1.35
TRIM11Q96F44 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
TRIM11Q96F44 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM11Q96F44 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRIM11Q96F44 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM11Q96F44 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM11Q96F44 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM11Q96F44 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TRIM11Q96F44 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
TRIM11Q96F44 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
TRIM11Q96F44 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
TRIM11Q96F44 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.5■■□□□ 1.35
TRIM11Q96F44 AC009086.3-201ENST00000623486 1008 ntBASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms