Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.74■□□□□ 0.75
APH1AQ96BI3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
APH1AQ96BI3 MIR3181-201ENST00000578512 73 ntBASIC19.74■□□□□ 0.75
APH1AQ96BI3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.74■□□□□ 0.75
APH1AQ96BI3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.74■□□□□ 0.75
APH1AQ96BI3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
APH1AQ96BI3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APH1AQ96BI3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
APH1AQ96BI3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.74■□□□□ 0.75
APH1AQ96BI3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
APH1AQ96BI3 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
APH1AQ96BI3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APH1AQ96BI3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APH1AQ96BI3 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
APH1AQ96BI3 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.73■□□□□ 0.75
APH1AQ96BI3 AC011298.3-201ENST00000615796 283 ntBASIC19.73■□□□□ 0.75
APH1AQ96BI3 AC106739.1-201ENST00000617035 715 ntBASIC19.73■□□□□ 0.75
APH1AQ96BI3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.73■□□□□ 0.75
APH1AQ96BI3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APH1AQ96BI3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APH1AQ96BI3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
APH1AQ96BI3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
APH1AQ96BI3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
APH1AQ96BI3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 AC024257.2-201ENST00000549699 147 ntBASIC19.72■□□□□ 0.75
APH1AQ96BI3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 AL353803.4-201ENST00000565882 1934 ntBASIC19.72■□□□□ 0.75
APH1AQ96BI3 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.72■□□□□ 0.75
APH1AQ96BI3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.71■□□□□ 0.75
APH1AQ96BI3 AC092068.2-201ENST00000590491 1708 ntBASIC19.71■□□□□ 0.75
APH1AQ96BI3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
APH1AQ96BI3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
APH1AQ96BI3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.7■□□□□ 0.74
APH1AQ96BI3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.7■□□□□ 0.74
APH1AQ96BI3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.7■□□□□ 0.74
APH1AQ96BI3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.7■□□□□ 0.74
APH1AQ96BI3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
APH1AQ96BI3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.7■□□□□ 0.74
APH1AQ96BI3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 AL499627.2-201ENST00000606283 725 ntBASIC19.69■□□□□ 0.74
APH1AQ96BI3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APH1AQ96BI3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.69■□□□□ 0.74
APH1AQ96BI3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.68■□□□□ 0.74
APH1AQ96BI3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.68■□□□□ 0.74
APH1AQ96BI3 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.68■□□□□ 0.74
APH1AQ96BI3 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.68■□□□□ 0.74
APH1AQ96BI3 AC133561.4-201ENST00000566112 224 ntBASIC19.68■□□□□ 0.74
APH1AQ96BI3 AC136469.2-201ENST00000623944 1028 ntBASIC19.68■□□□□ 0.74
APH1AQ96BI3 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.68■□□□□ 0.74
APH1AQ96BI3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APH1AQ96BI3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms