Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.06■□□□□ 0.64
PTX4Q96A99 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.06■□□□□ 0.64
PTX4Q96A99 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.06■□□□□ 0.64
PTX4Q96A99 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PTX4Q96A99 HSD17B1P1-201ENST00000590052 955 ntBASIC19.06■□□□□ 0.64
PTX4Q96A99 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTX4Q96A99 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX4Q96A99 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.06■□□□□ 0.64
PTX4Q96A99 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX4Q96A99 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTX4Q96A99 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTX4Q96A99 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTX4Q96A99 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTX4Q96A99 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTX4Q96A99 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX4Q96A99 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.05■□□□□ 0.64
PTX4Q96A99 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.05■□□□□ 0.64
PTX4Q96A99 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTX4Q96A99 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTX4Q96A99 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.05■□□□□ 0.64
PTX4Q96A99 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
PTX4Q96A99 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTX4Q96A99 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PTX4Q96A99 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.05■□□□□ 0.64
PTX4Q96A99 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTX4Q96A99 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTX4Q96A99 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.04■□□□□ 0.64
PTX4Q96A99 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.04■□□□□ 0.64
PTX4Q96A99 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
PTX4Q96A99 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.04■□□□□ 0.64
PTX4Q96A99 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PTX4Q96A99 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTX4Q96A99 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTX4Q96A99 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 AC004448.1-201ENST00000458332 883 ntBASIC19.03■□□□□ 0.64
PTX4Q96A99 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 U85056.1-201ENST00000616429 682 ntBASIC19.03■□□□□ 0.64
PTX4Q96A99 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.03■□□□□ 0.64
PTX4Q96A99 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTX4Q96A99 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.03■□□□□ 0.64
PTX4Q96A99 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTX4Q96A99 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
PTX4Q96A99 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.02■□□□□ 0.64
PTX4Q96A99 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.02■□□□□ 0.64
PTX4Q96A99 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.02■□□□□ 0.64
PTX4Q96A99 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.02■□□□□ 0.64
PTX4Q96A99 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTX4Q96A99 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
PTX4Q96A99 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
PTX4Q96A99 AC080038.3-201ENST00000623346 1952 ntBASIC19.01■□□□□ 0.63
PTX4Q96A99 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC19.01■□□□□ 0.63
PTX4Q96A99 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTX4Q96A99 AC087742.1-201ENST00000575880 1738 ntBASIC19.01■□□□□ 0.63
PTX4Q96A99 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
PTX4Q96A99 AC129492.7-201ENST00000622992 756 ntBASIC19.01■□□□□ 0.63
PTX4Q96A99 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.01■□□□□ 0.63
PTX4Q96A99 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTX4Q96A99 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTX4Q96A99 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
PTX4Q96A99 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19■□□□□ 0.63
PTX4Q96A99 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PTX4Q96A99 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19■□□□□ 0.63
PTX4Q96A99 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19■□□□□ 0.63
PTX4Q96A99 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
PTX4Q96A99 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19■□□□□ 0.63
PTX4Q96A99 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19■□□□□ 0.63
PTX4Q96A99 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19■□□□□ 0.63
PTX4Q96A99 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.99■□□□□ 0.63
PTX4Q96A99 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.99■□□□□ 0.63
PTX4Q96A99 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PTX4Q96A99 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms