Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFWD2Q8NHY2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.02■■□□□ 1.12
RFWD2Q8NHY2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFWD2Q8NHY2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFWD2Q8NHY2 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC22.01■■□□□ 1.11
RFWD2Q8NHY2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 FBXW4P1-201ENST00000426721 2239 ntBASIC22■■□□□ 1.11
RFWD2Q8NHY2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 RPS2P7-201ENST00000447334 885 ntBASIC22■■□□□ 1.11
RFWD2Q8NHY2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22■■□□□ 1.11
RFWD2Q8NHY2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFWD2Q8NHY2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFWD2Q8NHY2 AC131274.2-201ENST00000580697 1507 ntBASIC22■■□□□ 1.11
RFWD2Q8NHY2 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 AC133552.2-201ENST00000619106 1032 ntBASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 AC080038.3-201ENST00000623346 1952 ntBASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.99■■□□□ 1.11
RFWD2Q8NHY2 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 AC009831.1-201ENST00000580420 1582 ntBASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFWD2Q8NHY2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD2Q8NHY2 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.97■■□□□ 1.11
RFWD2Q8NHY2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD2Q8NHY2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
RFWD2Q8NHY2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFWD2Q8NHY2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 AL592295.1-201ENST00000400984 884 ntBASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 SLC25A24-204ENST00000569674 2357 ntBASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.96■■□□□ 1.11
RFWD2Q8NHY2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RFWD2Q8NHY2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RFWD2Q8NHY2 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms