Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 AL592293.1-201ENST00000502889 1188 ntBASIC21.55■■□□□ 1.04
HIPK4Q8NE63 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HIPK4Q8NE63 AC090877.2-201ENST00000558441 1738 ntBASIC21.55■■□□□ 1.04
HIPK4Q8NE63 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HIPK4Q8NE63 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 SPCS2P3-201ENST00000500401 656 ntBASIC21.53■■□□□ 1.04
HIPK4Q8NE63 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HIPK4Q8NE63 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 AC087393.1-201ENST00000582896 145 ntBASIC21.52■■□□□ 1.04
HIPK4Q8NE63 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
HIPK4Q8NE63 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 AL592295.1-201ENST00000400984 884 ntBASIC21.51■■□□□ 1.03
HIPK4Q8NE63 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.51■■□□□ 1.03
HIPK4Q8NE63 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.5■■□□□ 1.03
HIPK4Q8NE63 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HIPK4Q8NE63 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 MIR6765-201ENST00000614092 87 ntBASIC21.49■■□□□ 1.03
HIPK4Q8NE63 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HIPK4Q8NE63 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
HIPK4Q8NE63 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 AL161729.1-201ENST00000604104 1402 ntBASIC21.47■■□□□ 1.03
HIPK4Q8NE63 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
HIPK4Q8NE63 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 389.5 ms