Protein–RNA interactions for Protein: Q8N5H7

SH2D3C, SH2 domain-containing protein 3C, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3CQ8N5H7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D3CQ8N5H7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.52■■□□□ 1.36
SH2D3CQ8N5H7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
SH2D3CQ8N5H7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SH2D3CQ8N5H7 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SH2D3CQ8N5H7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SH2D3CQ8N5H7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 AC004448.1-201ENST00000458332 883 ntBASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SH2D3CQ8N5H7 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 MIR6722-201ENST00000617286 78 ntBASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 AC131274.2-201ENST00000580697 1507 ntBASIC23.49■■□□□ 1.35
SH2D3CQ8N5H7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 GUSBP5-202ENST00000510805 1989 ntBASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
SH2D3CQ8N5H7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC23.47■■□□□ 1.35
SH2D3CQ8N5H7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 ANOS2P-203ENST00000472227 1816 ntBASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 AL117332.1-201ENST00000622628 974 ntBASIC23.46■■□□□ 1.35
SH2D3CQ8N5H7 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
SH2D3CQ8N5H7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
SH2D3CQ8N5H7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.35
SH2D3CQ8N5H7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SH2D3CQ8N5H7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
SH2D3CQ8N5H7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
SH2D3CQ8N5H7 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
SH2D3CQ8N5H7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.45■■□□□ 1.34
SH2D3CQ8N5H7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.44■■□□□ 1.34
SH2D3CQ8N5H7 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 MIR3621-201ENST00000580529 85 ntBASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
SH2D3CQ8N5H7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.43■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 9 ms