Protein–RNA interactions for Protein: Q8N535

LINC00471, Putative uncharacterized protein encoded by LINC00471, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00471Q8N535 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.4■□□□□ 0.86
LINC00471Q8N535 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.4■□□□□ 0.86
LINC00471Q8N535 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00471Q8N535 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
LINC00471Q8N535 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00471Q8N535 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
LINC00471Q8N535 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00471Q8N535 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LINC00471Q8N535 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LINC00471Q8N535 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00471Q8N535 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LINC00471Q8N535 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00471Q8N535 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00471Q8N535 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00471Q8N535 AC092053.2-201ENST00000640557 1818 ntBASIC20.39■□□□□ 0.85
LINC00471Q8N535 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00471Q8N535 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LINC00471Q8N535 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00471Q8N535 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00471Q8N535 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00471Q8N535 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00471Q8N535 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
LINC00471Q8N535 HSD17B1P1-201ENST00000590052 955 ntBASIC20.38■□□□□ 0.85
LINC00471Q8N535 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00471Q8N535 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00471Q8N535 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 BHLHE23-202ENST00000612929 1109 ntBASIC20.37■□□□□ 0.85
LINC00471Q8N535 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00471Q8N535 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LINC00471Q8N535 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 DUX4L18-201ENST00000553347 1267 ntBASIC20.36■□□□□ 0.85
LINC00471Q8N535 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
LINC00471Q8N535 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00471Q8N535 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00471Q8N535 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00471Q8N535 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 AC144652.1-201ENST00000609974 1624 ntBASIC20.35■□□□□ 0.85
LINC00471Q8N535 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00471Q8N535 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00471Q8N535 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00471Q8N535 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LINC00471Q8N535 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.34■□□□□ 0.85
LINC00471Q8N535 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LINC00471Q8N535 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.34■□□□□ 0.85
LINC00471Q8N535 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.34■□□□□ 0.85
LINC00471Q8N535 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
LINC00471Q8N535 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00471Q8N535 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.33■□□□□ 0.85
LINC00471Q8N535 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00471Q8N535 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LINC00471Q8N535 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00471Q8N535 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00471Q8N535 NTF6A-201ENST00000591175 560 ntBASIC20.33■□□□□ 0.85
LINC00471Q8N535 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
LINC00471Q8N535 AC139530.1-201ENST00000575312 1977 ntBASIC20.33■□□□□ 0.84
LINC00471Q8N535 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00471Q8N535 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
LINC00471Q8N535 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00471Q8N535 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00471Q8N535 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00471Q8N535 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms