Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ARHGEF28Q8N1W1 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 MIR6084-201ENST00000622012 110 ntBASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 AL358852.1-201ENST00000623174 1268 ntBASIC31.35■■■□□ 2.61
ARHGEF28Q8N1W1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ARHGEF28Q8N1W1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARHGEF28Q8N1W1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ARHGEF28Q8N1W1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC31.32■■■□□ 2.61
ARHGEF28Q8N1W1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC31.32■■■□□ 2.61
ARHGEF28Q8N1W1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
ARHGEF28Q8N1W1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.32■■■□□ 2.61
ARHGEF28Q8N1W1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.61
ARHGEF28Q8N1W1 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 AL354811.1-201ENST00000610286 706 ntBASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 IKBKGP1-201ENST00000612193 1073 ntBASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
ARHGEF28Q8N1W1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC31.31■■■□□ 2.6
ARHGEF28Q8N1W1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC31.3■■■□□ 2.6
ARHGEF28Q8N1W1 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ARHGEF28Q8N1W1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
ARHGEF28Q8N1W1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC31.28■■■□□ 2.6
ARHGEF28Q8N1W1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.28■■■□□ 2.6
ARHGEF28Q8N1W1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 AC123595.1-201ENST00000440769 1046 ntBASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 AC092437.1-201ENST00000624794 1048 ntBASIC31.27■■■□□ 2.6
ARHGEF28Q8N1W1 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.26■■■□□ 2.59
ARHGEF28Q8N1W1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 CCDC92B-201ENST00000575506 885 ntBASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ARHGEF28Q8N1W1 LINC01124-201ENST00000409786 2117 ntBASIC31.25■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms