Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC33.69■■■□□ 2.98
ABCA6Q8N139 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC33.69■■■□□ 2.98
ABCA6Q8N139 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC33.69■■■□□ 2.98
ABCA6Q8N139 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
ABCA6Q8N139 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
ABCA6Q8N139 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC33.69■■■□□ 2.98
ABCA6Q8N139 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC33.69■■■□□ 2.98
ABCA6Q8N139 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC33.68■■■□□ 2.98
ABCA6Q8N139 AC105233.4-201ENST00000642045 216 ntBASIC33.68■■■□□ 2.98
ABCA6Q8N139 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
ABCA6Q8N139 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC33.68■■■□□ 2.98
ABCA6Q8N139 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC33.68■■■□□ 2.98
ABCA6Q8N139 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
ABCA6Q8N139 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC33.67■■■□□ 2.98
ABCA6Q8N139 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC33.67■■■□□ 2.98
ABCA6Q8N139 MAP2K4P1-201ENST00000438453 1195 ntBASIC33.67■■■□□ 2.98
ABCA6Q8N139 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC33.67■■■□□ 2.98
ABCA6Q8N139 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
ABCA6Q8N139 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC33.67■■■□□ 2.98
ABCA6Q8N139 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
ABCA6Q8N139 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
ABCA6Q8N139 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC33.66■■■□□ 2.98
ABCA6Q8N139 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC33.66■■■□□ 2.98
ABCA6Q8N139 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC33.66■■■□□ 2.98
ABCA6Q8N139 CEBPA-AS1-201ENST00000592982 2198 ntBASIC33.65■■■□□ 2.98
ABCA6Q8N139 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC33.65■■■□□ 2.98
ABCA6Q8N139 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
ABCA6Q8N139 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC33.65■■■□□ 2.98
ABCA6Q8N139 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC33.65■■■□□ 2.98
ABCA6Q8N139 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC33.65■■■□□ 2.98
ABCA6Q8N139 AC004854.2-201ENST00000608450 1441 ntBASIC33.65■■■□□ 2.98
ABCA6Q8N139 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
ABCA6Q8N139 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
ABCA6Q8N139 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
ABCA6Q8N139 HLA-L-211ENST00000482052 1765 ntBASIC33.64■■■□□ 2.98
ABCA6Q8N139 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.98
ABCA6Q8N139 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC33.64■■■□□ 2.98
ABCA6Q8N139 MFF-208ENST00000409616 1247 ntTSL 5 BASIC33.64■■■□□ 2.98
ABCA6Q8N139 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC33.64■■■□□ 2.98
ABCA6Q8N139 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
ABCA6Q8N139 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
ABCA6Q8N139 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC33.63■■■□□ 2.97
ABCA6Q8N139 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
ABCA6Q8N139 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC33.63■■■□□ 2.97
ABCA6Q8N139 AP004607.4-201ENST00000530158 1459 ntBASIC33.62■■■□□ 2.97
ABCA6Q8N139 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC33.62■■■□□ 2.97
ABCA6Q8N139 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC33.62■■■□□ 2.97
ABCA6Q8N139 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
ABCA6Q8N139 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC33.62■■■□□ 2.97
ABCA6Q8N139 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
ABCA6Q8N139 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
ABCA6Q8N139 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC33.61■■■□□ 2.97
ABCA6Q8N139 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC33.61■■■□□ 2.97
ABCA6Q8N139 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC33.61■■■□□ 2.97
ABCA6Q8N139 DUSP8P4-201ENST00000399538 1761 ntBASIC33.61■■■□□ 2.97
ABCA6Q8N139 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC33.61■■■□□ 2.97
ABCA6Q8N139 BID-214ENST00000617586 542 ntTSL 5 BASIC33.61■■■□□ 2.97
ABCA6Q8N139 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC33.61■■■□□ 2.97
ABCA6Q8N139 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC33.61■■■□□ 2.97
ABCA6Q8N139 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
ABCA6Q8N139 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC33.6■■■□□ 2.97
ABCA6Q8N139 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
ABCA6Q8N139 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC33.6■■■□□ 2.97
ABCA6Q8N139 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC33.6■■■□□ 2.97
ABCA6Q8N139 AC006970.2-201ENST00000450065 779 ntBASIC33.6■■■□□ 2.97
ABCA6Q8N139 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC33.6■■■□□ 2.97
ABCA6Q8N139 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC33.6■■■□□ 2.97
ABCA6Q8N139 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC33.59■■■□□ 2.97
ABCA6Q8N139 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC33.59■■■□□ 2.97
ABCA6Q8N139 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
ABCA6Q8N139 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC33.59■■■□□ 2.97
ABCA6Q8N139 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC33.59■■■□□ 2.97
ABCA6Q8N139 AL109923.1-201ENST00000618799 583 ntBASIC33.59■■■□□ 2.97
ABCA6Q8N139 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC33.59■■■□□ 2.97
ABCA6Q8N139 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC33.59■■■□□ 2.97
ABCA6Q8N139 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC33.59■■■□□ 2.97
ABCA6Q8N139 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC33.58■■■□□ 2.97
ABCA6Q8N139 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC33.58■■■□□ 2.97
ABCA6Q8N139 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC33.57■■■□□ 2.97
ABCA6Q8N139 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC33.57■■■□□ 2.97
ABCA6Q8N139 NCF1B-203ENST00000435988 1254 ntBASIC33.57■■■□□ 2.97
ABCA6Q8N139 AL121749.1-202ENST00000609313 2153 ntBASIC33.57■■■□□ 2.96
ABCA6Q8N139 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC33.57■■■□□ 2.96
ABCA6Q8N139 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
ABCA6Q8N139 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC33.56■■■□□ 2.96
ABCA6Q8N139 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC33.56■■■□□ 2.96
ABCA6Q8N139 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
ABCA6Q8N139 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC33.56■■■□□ 2.96
ABCA6Q8N139 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC33.56■■■□□ 2.96
ABCA6Q8N139 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
ABCA6Q8N139 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
ABCA6Q8N139 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
ABCA6Q8N139 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC33.55■■■□□ 2.96
ABCA6Q8N139 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC33.55■■■□□ 2.96
ABCA6Q8N139 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC33.55■■■□□ 2.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms