Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CHPFQ8IZ52 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CHPFQ8IZ52 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CHPFQ8IZ52 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 AL499627.2-201ENST00000606283 725 ntBASIC22.7■■□□□ 1.22
CHPFQ8IZ52 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 FP325331.1-202ENST00000623531 1380 ntBASIC22.7■■□□□ 1.22
CHPFQ8IZ52 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CHPFQ8IZ52 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CHPFQ8IZ52 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 IGHV3-19-201ENST00000521488 291 ntBASIC22.68■■□□□ 1.22
CHPFQ8IZ52 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CHPFQ8IZ52 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 DUX4L4-201ENST00000566884 1269 ntBASIC22.67■■□□□ 1.22
CHPFQ8IZ52 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CHPFQ8IZ52 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CHPFQ8IZ52 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 LINC01529-204ENST00000636474 1715 ntBASIC22.65■■□□□ 1.22
CHPFQ8IZ52 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CHPFQ8IZ52 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.64■■□□□ 1.22
CHPFQ8IZ52 AC144652.1-201ENST00000609974 1624 ntBASIC22.64■■□□□ 1.22
CHPFQ8IZ52 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CHPFQ8IZ52 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
CHPFQ8IZ52 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms