Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRRC28Q86X40 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.77■□□□□ 0.76
LRRC28Q86X40 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.77■□□□□ 0.75
LRRC28Q86X40 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.77■□□□□ 0.75
LRRC28Q86X40 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.77■□□□□ 0.75
LRRC28Q86X40 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LRRC28Q86X40 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.76■□□□□ 0.75
LRRC28Q86X40 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 THA1P-201ENST00000590384 1145 ntBASIC19.76■□□□□ 0.75
LRRC28Q86X40 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LRRC28Q86X40 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC28Q86X40 AC120024.1-201ENST00000562672 995 ntBASIC19.75■□□□□ 0.75
LRRC28Q86X40 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC28Q86X40 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC28Q86X40 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LRRC28Q86X40 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.75■□□□□ 0.75
LRRC28Q86X40 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC28Q86X40 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.74■□□□□ 0.75
LRRC28Q86X40 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.74■□□□□ 0.75
LRRC28Q86X40 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.74■□□□□ 0.75
LRRC28Q86X40 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.74■□□□□ 0.75
LRRC28Q86X40 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LRRC28Q86X40 ESRRAP2-201ENST00000418437 1549 ntBASIC19.73■□□□□ 0.75
LRRC28Q86X40 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LRRC28Q86X40 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.73■□□□□ 0.75
LRRC28Q86X40 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LRRC28Q86X40 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.73■□□□□ 0.75
LRRC28Q86X40 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 AL137060.1-201ENST00000618151 2648 ntBASIC19.72■□□□□ 0.75
LRRC28Q86X40 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LRRC28Q86X40 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
LRRC28Q86X40 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 AC011551.1-201ENST00000614101 683 ntBASIC19.71■□□□□ 0.75
LRRC28Q86X40 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LRRC28Q86X40 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC28Q86X40 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.71■□□□□ 0.75
LRRC28Q86X40 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LRRC28Q86X40 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
LRRC28Q86X40 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
LRRC28Q86X40 Z92544.1-202ENST00000571933 1220 ntBASIC19.69■□□□□ 0.74
LRRC28Q86X40 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.69■□□□□ 0.74
LRRC28Q86X40 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.69■□□□□ 0.74
LRRC28Q86X40 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms