Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
VPS36Q86VN1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
VPS36Q86VN1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS36Q86VN1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS36Q86VN1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS36Q86VN1 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS36Q86VN1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS36Q86VN1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
VPS36Q86VN1 AC137630.3-201ENST00000607245 391 ntBASIC23.95■■□□□ 1.42
VPS36Q86VN1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
VPS36Q86VN1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.95■■□□□ 1.42
VPS36Q86VN1 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
VPS36Q86VN1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC23.94■■□□□ 1.42
VPS36Q86VN1 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 AL451085.2-201ENST00000605085 799 ntBASIC23.94■■□□□ 1.42
VPS36Q86VN1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
VPS36Q86VN1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
VPS36Q86VN1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.93■■□□□ 1.42
VPS36Q86VN1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 AL031848.2-201ENST00000607670 837 ntBASIC23.93■■□□□ 1.42
VPS36Q86VN1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
VPS36Q86VN1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.93■■□□□ 1.42
VPS36Q86VN1 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS36Q86VN1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
VPS36Q86VN1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS36Q86VN1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
VPS36Q86VN1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.92■■□□□ 1.42
VPS36Q86VN1 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.92■■□□□ 1.42
VPS36Q86VN1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
VPS36Q86VN1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS36Q86VN1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
VPS36Q86VN1 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS36Q86VN1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS36Q86VN1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
VPS36Q86VN1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.91■■□□□ 1.42
VPS36Q86VN1 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 AC144652.1-201ENST00000609974 1624 ntBASIC23.9■■□□□ 1.42
VPS36Q86VN1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
VPS36Q86VN1 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 EP400NL-214ENST00000641289 2402 ntBASIC23.9■■□□□ 1.42
VPS36Q86VN1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 ECEL1P1-201ENST00000373592 1742 ntBASIC23.9■■□□□ 1.42
VPS36Q86VN1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.9■■□□□ 1.42
VPS36Q86VN1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
VPS36Q86VN1 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.89■■□□□ 1.42
VPS36Q86VN1 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.89■■□□□ 1.41
VPS36Q86VN1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC23.89■■□□□ 1.41
VPS36Q86VN1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.89■■□□□ 1.41
VPS36Q86VN1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
VPS36Q86VN1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 LINC00526-201ENST00000581067 1875 ntBASIC23.88■■□□□ 1.41
VPS36Q86VN1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
VPS36Q86VN1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
VPS36Q86VN1 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.87■■□□□ 1.41
VPS36Q86VN1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.87■■□□□ 1.41
VPS36Q86VN1 AL035685.1-201ENST00000636663 812 ntBASIC23.87■■□□□ 1.41
VPS36Q86VN1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
VPS36Q86VN1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms