Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATG4DQ86TL0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATG4DQ86TL0 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATG4DQ86TL0 MIR6724-1-201ENST00000616420 92 ntBASIC20.28■□□□□ 0.84
ATG4DQ86TL0 MIR6724-2-201ENST00000616483 92 ntBASIC20.28■□□□□ 0.84
ATG4DQ86TL0 MIR6724-4-201ENST00000617390 92 ntBASIC20.28■□□□□ 0.84
ATG4DQ86TL0 MIR6724-3-201ENST00000622482 92 ntBASIC20.28■□□□□ 0.84
ATG4DQ86TL0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATG4DQ86TL0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATG4DQ86TL0 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATG4DQ86TL0 FP325331.1-202ENST00000623531 1380 ntBASIC20.27■□□□□ 0.84
ATG4DQ86TL0 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.27■□□□□ 0.84
ATG4DQ86TL0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.27■□□□□ 0.84
ATG4DQ86TL0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.27■□□□□ 0.84
ATG4DQ86TL0 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
ATG4DQ86TL0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATG4DQ86TL0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
ATG4DQ86TL0 C1orf229-201ENST00000623686 2258 ntBASIC20.27■□□□□ 0.83
ATG4DQ86TL0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 LINC01529-204ENST00000636474 1715 ntBASIC20.26■□□□□ 0.83
ATG4DQ86TL0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATG4DQ86TL0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATG4DQ86TL0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATG4DQ86TL0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATG4DQ86TL0 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 C17orf82-201ENST00000623772 1530 ntBASIC20.22■□□□□ 0.83
ATG4DQ86TL0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATG4DQ86TL0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 AC008406.3-201ENST00000620001 1374 ntBASIC20.21■□□□□ 0.83
ATG4DQ86TL0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 DUX4L4-201ENST00000566884 1269 ntBASIC20.21■□□□□ 0.83
ATG4DQ86TL0 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATG4DQ86TL0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATG4DQ86TL0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATG4DQ86TL0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 AL117332.1-201ENST00000622628 974 ntBASIC20.19■□□□□ 0.82
ATG4DQ86TL0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.19■□□□□ 0.82
ATG4DQ86TL0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ATG4DQ86TL0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms