Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.34■■■□□ 2.45
USP31Q70CQ4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
USP31Q70CQ4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
USP31Q70CQ4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC30.33■■■□□ 2.45
USP31Q70CQ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 IKBKGP1-201ENST00000612193 1073 ntBASIC30.33■■■□□ 2.45
USP31Q70CQ4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
USP31Q70CQ4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC30.33■■■□□ 2.45
USP31Q70CQ4 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
USP31Q70CQ4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.45
USP31Q70CQ4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP31Q70CQ4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC30.32■■■□□ 2.44
USP31Q70CQ4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC30.32■■■□□ 2.44
USP31Q70CQ4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
USP31Q70CQ4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP31Q70CQ4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
USP31Q70CQ4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP31Q70CQ4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.31■■■□□ 2.44
USP31Q70CQ4 AP005435.1-201ENST00000529293 1178 ntBASIC30.31■■■□□ 2.44
USP31Q70CQ4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC30.31■■■□□ 2.44
USP31Q70CQ4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.31■■■□□ 2.44
USP31Q70CQ4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
USP31Q70CQ4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.3■■■□□ 2.44
USP31Q70CQ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP31Q70CQ4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC30.3■■■□□ 2.44
USP31Q70CQ4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.3■■■□□ 2.44
USP31Q70CQ4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
USP31Q70CQ4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
USP31Q70CQ4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
USP31Q70CQ4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC30.29■■■□□ 2.44
USP31Q70CQ4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
USP31Q70CQ4 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP31Q70CQ4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP31Q70CQ4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.29■■■□□ 2.44
USP31Q70CQ4 CCDC92B-201ENST00000575506 885 ntBASIC30.29■■■□□ 2.44
USP31Q70CQ4 TERF1P2-201ENST00000583350 1212 ntBASIC30.29■■■□□ 2.44
USP31Q70CQ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.29■■■□□ 2.44
USP31Q70CQ4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC30.29■■■□□ 2.44
USP31Q70CQ4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP31Q70CQ4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
USP31Q70CQ4 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
USP31Q70CQ4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC30.28■■■□□ 2.44
USP31Q70CQ4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC30.27■■■□□ 2.44
USP31Q70CQ4 LINC01529-204ENST00000636474 1715 ntBASIC30.27■■■□□ 2.44
USP31Q70CQ4 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC30.27■■■□□ 2.44
USP31Q70CQ4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.27■■■□□ 2.44
USP31Q70CQ4 AC020928.2-201ENST00000588717 2197 ntBASIC30.27■■■□□ 2.44
USP31Q70CQ4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
USP31Q70CQ4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
USP31Q70CQ4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.26■■■□□ 2.43
USP31Q70CQ4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
USP31Q70CQ4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
USP31Q70CQ4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.43
USP31Q70CQ4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC30.26■■■□□ 2.43
USP31Q70CQ4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC30.26■■■□□ 2.43
USP31Q70CQ4 RARRES2P11-201ENST00000635158 484 ntBASIC30.26■■■□□ 2.43
USP31Q70CQ4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
USP31Q70CQ4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC30.25■■■□□ 2.43
USP31Q70CQ4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP31Q70CQ4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP31Q70CQ4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP31Q70CQ4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC30.25■■■□□ 2.43
USP31Q70CQ4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
USP31Q70CQ4 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
USP31Q70CQ4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC30.25■■■□□ 2.43
USP31Q70CQ4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.25■■■□□ 2.43
USP31Q70CQ4 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
USP31Q70CQ4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
USP31Q70CQ4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
USP31Q70CQ4 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.24■■■□□ 2.43
USP31Q70CQ4 LHPP-203ENST00000392757 840 ntTSL 3 BASIC30.24■■■□□ 2.43
USP31Q70CQ4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
USP31Q70CQ4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.24■■■□□ 2.43
USP31Q70CQ4 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
USP31Q70CQ4 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC30.24■■■□□ 2.43
USP31Q70CQ4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
USP31Q70CQ4 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP31Q70CQ4 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
USP31Q70CQ4 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
USP31Q70CQ4 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
USP31Q70CQ4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms