Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00336Q6ZUF6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00336Q6ZUF6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00336Q6ZUF6 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC14.95□□□□□ -0.02
LINC00336Q6ZUF6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LINC00336Q6ZUF6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC00336Q6ZUF6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC00336Q6ZUF6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 AC006970.2-201ENST00000450065 779 ntBASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 AC073111.5-205ENST00000641717 521 ntBASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC00336Q6ZUF6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 AC104771.1-201ENST00000603335 964 ntBASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 RAP2CP1-201ENST00000605103 478 ntBASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 BID-214ENST00000617586 542 ntTSL 5 BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 ESRRAP2-201ENST00000418437 1549 ntBASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC00336Q6ZUF6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 CDCA4P2-201ENST00000441182 718 ntBASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 AC133637.1-201ENST00000624115 1537 ntBASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.9□□□□□ -0.02
LINC00336Q6ZUF6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00336Q6ZUF6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00336Q6ZUF6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 1232.8 ms