Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.95■■□□□ 1.42
DCLRE1AQ6PJP8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DCLRE1AQ6PJP8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DCLRE1AQ6PJP8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
DCLRE1AQ6PJP8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
DCLRE1AQ6PJP8 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 MIR6821-201ENST00000617625 74 ntBASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
DCLRE1AQ6PJP8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.92■■□□□ 1.42
DCLRE1AQ6PJP8 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
DCLRE1AQ6PJP8 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
DCLRE1AQ6PJP8 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
DCLRE1AQ6PJP8 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
DCLRE1AQ6PJP8 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
DCLRE1AQ6PJP8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
DCLRE1AQ6PJP8 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 AC097381.1-201ENST00000429019 1296 ntBASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 OR2I1P-207ENST00000453522 948 ntBASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
DCLRE1AQ6PJP8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
DCLRE1AQ6PJP8 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 TSPY26P-201ENST00000476365 1326 ntBASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
DCLRE1AQ6PJP8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 AC010525.1-201ENST00000585559 441 ntBASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
DCLRE1AQ6PJP8 AC079630.1-202ENST00000618127 1840 ntBASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 IGHV3-19-201ENST00000521488 291 ntBASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
DCLRE1AQ6PJP8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms