Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 AC133637.1-201ENST00000624115 1537 ntBASIC22.4■■□□□ 1.18
BRAT1Q6PJG6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC22.4■■□□□ 1.18
BRAT1Q6PJG6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.4■■□□□ 1.18
BRAT1Q6PJG6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
BRAT1Q6PJG6 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
BRAT1Q6PJG6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.39■■□□□ 1.18
BRAT1Q6PJG6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
BRAT1Q6PJG6 ANOS2P-203ENST00000472227 1816 ntBASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 AL353803.4-201ENST00000565882 1934 ntBASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
BRAT1Q6PJG6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 AC092068.2-201ENST00000590491 1708 ntBASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SUDS3P1-201ENST00000505831 966 ntBASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 AC142381.2-201ENST00000566120 298 ntBASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
BRAT1Q6PJG6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
BRAT1Q6PJG6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
BRAT1Q6PJG6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 MIR939-201ENST00000401314 82 ntBASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 AP001330.3-201ENST00000520123 633 ntBASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
BRAT1Q6PJG6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 AC027682.1-201ENST00000562846 899 ntBASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 AF213884.3-201ENST00000563833 479 ntBASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
BRAT1Q6PJG6 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 BX842568.3-201ENST00000418104 571 ntBASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 AC091305.1-201ENST00000479476 895 ntBASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 AL136967.2-201ENST00000623968 743 ntBASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
BRAT1Q6PJG6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
BRAT1Q6PJG6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.16
BRAT1Q6PJG6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
BRAT1Q6PJG6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms