Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NIPAL3Q6P499 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NIPAL3Q6P499 LINC00565-201ENST00000562710 2331 ntBASIC20.27■□□□□ 0.84
NIPAL3Q6P499 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.27■□□□□ 0.83
NIPAL3Q6P499 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NIPAL3Q6P499 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NIPAL3Q6P499 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.27■□□□□ 0.83
NIPAL3Q6P499 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 LINC00526-201ENST00000581067 1875 ntBASIC20.26■□□□□ 0.83
NIPAL3Q6P499 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 GUSBP5-201ENST00000418136 578 ntBASIC20.26■□□□□ 0.83
NIPAL3Q6P499 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NIPAL3Q6P499 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 UNC93B8-201ENST00000511903 705 ntBASIC20.25■□□□□ 0.83
NIPAL3Q6P499 AC010997.5-201ENST00000609182 354 ntBASIC20.25■□□□□ 0.83
NIPAL3Q6P499 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NIPAL3Q6P499 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 MIR6722-201ENST00000617286 78 ntBASIC20.24■□□□□ 0.83
NIPAL3Q6P499 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 ECEL1P1-201ENST00000373592 1742 ntBASIC20.24■□□□□ 0.83
NIPAL3Q6P499 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NIPAL3Q6P499 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NIPAL3Q6P499 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 KRT16P3-201ENST00000439127 1283 ntBASIC20.22■□□□□ 0.83
NIPAL3Q6P499 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.22■□□□□ 0.83
NIPAL3Q6P499 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NIPAL3Q6P499 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms