Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DEPDC1Q5TB30 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
DEPDC1Q5TB30 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 GUSBP5-201ENST00000418136 578 ntBASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
DEPDC1Q5TB30 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 DUSP8P3-201ENST00000399571 1760 ntBASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 AC079630.1-202ENST00000618127 1840 ntBASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
DEPDC1Q5TB30 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 MIR6724-1-201ENST00000616420 92 ntBASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 MIR6724-2-201ENST00000616483 92 ntBASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 MIR6724-4-201ENST00000617390 92 ntBASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 MIR6724-3-201ENST00000622482 92 ntBASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
DEPDC1Q5TB30 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
DEPDC1Q5TB30 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.45■■□□□ 1.02
DEPDC1Q5TB30 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 KRT16P3-201ENST00000439127 1283 ntBASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
DEPDC1Q5TB30 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DEPDC1Q5TB30 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
DEPDC1Q5TB30 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
DEPDC1Q5TB30 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
DEPDC1Q5TB30 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
DEPDC1Q5TB30 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms