Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RBM48Q5RL73 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.38■□□□□ 0.85
RBM48Q5RL73 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RBM48Q5RL73 AL022069.1-201ENST00000568025 1636 ntBASIC20.38■□□□□ 0.85
RBM48Q5RL73 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RBM48Q5RL73 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
RBM48Q5RL73 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RBM48Q5RL73 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RBM48Q5RL73 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RBM48Q5RL73 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
RBM48Q5RL73 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RBM48Q5RL73 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 RPS2P35-201ENST00000443417 897 ntBASIC20.36■□□□□ 0.85
RBM48Q5RL73 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.36■□□□□ 0.85
RBM48Q5RL73 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RBM48Q5RL73 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.36■□□□□ 0.85
RBM48Q5RL73 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RBM48Q5RL73 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RBM48Q5RL73 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
RBM48Q5RL73 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 ALDH1A3-203ENST00000557963 1670 ntBASIC20.35■□□□□ 0.85
RBM48Q5RL73 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RBM48Q5RL73 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.35■□□□□ 0.85
RBM48Q5RL73 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
RBM48Q5RL73 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RBM48Q5RL73 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 FAM99A-202ENST00000538190 1989 ntBASIC20.34■□□□□ 0.85
RBM48Q5RL73 RP9P-202ENST00000450133 1212 ntBASIC20.34■□□□□ 0.85
RBM48Q5RL73 ZNRF2P2-203ENST00000454624 420 ntBASIC20.34■□□□□ 0.85
RBM48Q5RL73 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.34■□□□□ 0.85
RBM48Q5RL73 CR559946.2-201ENST00000623684 991 ntBASIC20.34■□□□□ 0.85
RBM48Q5RL73 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RBM48Q5RL73 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
RBM48Q5RL73 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RBM48Q5RL73 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBM48Q5RL73 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RBM48Q5RL73 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBM48Q5RL73 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
RBM48Q5RL73 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
RBM48Q5RL73 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.33■□□□□ 0.85
RBM48Q5RL73 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
RBM48Q5RL73 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RBM48Q5RL73 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBM48Q5RL73 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RBM48Q5RL73 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.32■□□□□ 0.84
RBM48Q5RL73 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.32■□□□□ 0.84
RBM48Q5RL73 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RBM48Q5RL73 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBM48Q5RL73 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBM48Q5RL73 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBM48Q5RL73 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RBM48Q5RL73 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
RBM48Q5RL73 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBM48Q5RL73 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RBM48Q5RL73 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms