Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TTC38Q5R3I4 AC012676.1-201ENST00000574705 1949 ntBASIC25.41■■□□□ 1.66
TTC38Q5R3I4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC25.41■■□□□ 1.66
TTC38Q5R3I4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 RASSF1-AS1-201ENST00000629828 790 ntBASIC25.4■■□□□ 1.66
TTC38Q5R3I4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TTC38Q5R3I4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC38Q5R3I4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TTC38Q5R3I4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC38Q5R3I4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC25.39■■□□□ 1.66
TTC38Q5R3I4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
TTC38Q5R3I4 DUX4L4-201ENST00000566884 1269 ntBASIC25.39■■□□□ 1.66
TTC38Q5R3I4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.65
TTC38Q5R3I4 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
TTC38Q5R3I4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.39■■□□□ 1.65
TTC38Q5R3I4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
TTC38Q5R3I4 VGF-203ENST00000611537 1622 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
TTC38Q5R3I4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TTC38Q5R3I4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 C1orf229-201ENST00000623686 2258 ntBASIC25.36■■□□□ 1.65
TTC38Q5R3I4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TTC38Q5R3I4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TTC38Q5R3I4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 SRR-208ENST00000576848 588 ntTSL 4 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 AL512631.2-201ENST00000604634 923 ntBASIC25.34■■□□□ 1.65
TTC38Q5R3I4 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TTC38Q5R3I4 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.33■■□□□ 1.65
TTC38Q5R3I4 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
TTC38Q5R3I4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TTC38Q5R3I4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.32■■□□□ 1.64
TTC38Q5R3I4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms