Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6AP1LQ52LC2 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 SNX5-217ENST00000606557 1087 ntBASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 AC127496.7-201ENST00000625110 1798 ntBASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 AC242852.2-201ENST00000615738 1807 ntBASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6AP1LQ52LC2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6AP1LQ52LC2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 YBX1P4-201ENST00000392794 808 ntBASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 AL033527.3-201ENST00000566366 1196 ntBASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
ATP6AP1LQ52LC2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 AC103834.1-201ENST00000520383 144 ntBASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6AP1LQ52LC2 KRT8P33-201ENST00000508125 1423 ntBASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
ATP6AP1LQ52LC2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 AC144652.1-201ENST00000609974 1624 ntBASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 AC103724.3-201ENST00000564481 992 ntBASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.45■■□□□ 1.02
ATP6AP1LQ52LC2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms