Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 AC133561.1-201ENST00000568600 2415 ntBASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.55■■□□□ 1.36
PTPN20Q4JDL3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PTPN20Q4JDL3 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 DUX4L4-201ENST00000566884 1269 ntBASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.53■■□□□ 1.36
PTPN20Q4JDL3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.52■■□□□ 1.36
PTPN20Q4JDL3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
PTPN20Q4JDL3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PTPN20Q4JDL3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 AC131281.2-201ENST00000520478 145 ntBASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 MIR4466-201ENST00000606121 54 ntBASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PTPN20Q4JDL3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.49■■□□□ 1.35
PTPN20Q4JDL3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
PTPN20Q4JDL3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 AC006455.2-201ENST00000429931 906 ntBASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.47■■□□□ 1.35
PTPN20Q4JDL3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms