Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX4Q33E94 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX4Q33E94 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.71■□□□□ 0.91
RFX4Q33E94 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RFX4Q33E94 U85056.1-201ENST00000616429 682 ntBASIC20.71■□□□□ 0.91
RFX4Q33E94 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RFX4Q33E94 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX4Q33E94 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RFX4Q33E94 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 AC129492.7-201ENST00000622992 756 ntBASIC20.7■□□□□ 0.9
RFX4Q33E94 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RFX4Q33E94 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RFX4Q33E94 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.7■□□□□ 0.9
RFX4Q33E94 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RFX4Q33E94 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RFX4Q33E94 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RFX4Q33E94 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX4Q33E94 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.69■□□□□ 0.9
RFX4Q33E94 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.69■□□□□ 0.9
RFX4Q33E94 ALDH1A3-203ENST00000557963 1670 ntBASIC20.69■□□□□ 0.9
RFX4Q33E94 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RFX4Q33E94 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RFX4Q33E94 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 AC139530.1-201ENST00000575312 1977 ntBASIC20.68■□□□□ 0.9
RFX4Q33E94 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX4Q33E94 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX4Q33E94 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX4Q33E94 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX4Q33E94 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX4Q33E94 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX4Q33E94 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX4Q33E94 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX4Q33E94 AL137060.1-201ENST00000618151 2648 ntBASIC20.67■□□□□ 0.9
RFX4Q33E94 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RFX4Q33E94 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX4Q33E94 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
RFX4Q33E94 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX4Q33E94 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.65■□□□□ 0.9
RFX4Q33E94 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX4Q33E94 HSD17B1P1-201ENST00000590052 955 ntBASIC20.65■□□□□ 0.9
RFX4Q33E94 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RFX4Q33E94 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX4Q33E94 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.64■□□□□ 0.9
RFX4Q33E94 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX4Q33E94 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX4Q33E94 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX4Q33E94 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.64■□□□□ 0.89
RFX4Q33E94 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.64■□□□□ 0.89
RFX4Q33E94 AC011551.1-201ENST00000614101 683 ntBASIC20.64■□□□□ 0.89
RFX4Q33E94 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFX4Q33E94 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RFX4Q33E94 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFX4Q33E94 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX4Q33E94 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX4Q33E94 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX4Q33E94 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX4Q33E94 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX4Q33E94 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX4Q33E94 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX4Q33E94 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX4Q33E94 KRT18P60-201ENST00000312876 1297 ntBASIC20.63■□□□□ 0.89
RFX4Q33E94 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX4Q33E94 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX4Q33E94 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX4Q33E94 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX4Q33E94 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
RFX4Q33E94 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RFX4Q33E94 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX4Q33E94 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.62■□□□□ 0.89
RFX4Q33E94 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RFX4Q33E94 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX4Q33E94 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.62■□□□□ 0.89
RFX4Q33E94 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFX4Q33E94 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms