Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.06■□□□□ 0.64
EFNB3Q15768 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 AC133637.1-201ENST00000624115 1537 ntBASIC19.06■□□□□ 0.64
EFNB3Q15768 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
EFNB3Q15768 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
EFNB3Q15768 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.06■□□□□ 0.64
EFNB3Q15768 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
EFNB3Q15768 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.05■□□□□ 0.64
EFNB3Q15768 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EFNB3Q15768 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EFNB3Q15768 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.05■□□□□ 0.64
EFNB3Q15768 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
EFNB3Q15768 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EFNB3Q15768 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.05■□□□□ 0.64
EFNB3Q15768 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
EFNB3Q15768 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
EFNB3Q15768 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
EFNB3Q15768 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.04■□□□□ 0.64
EFNB3Q15768 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.04■□□□□ 0.64
EFNB3Q15768 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.04■□□□□ 0.64
EFNB3Q15768 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
EFNB3Q15768 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.04■□□□□ 0.64
EFNB3Q15768 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.04■□□□□ 0.64
EFNB3Q15768 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
EFNB3Q15768 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.04■□□□□ 0.64
EFNB3Q15768 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.04■□□□□ 0.64
EFNB3Q15768 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
EFNB3Q15768 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
EFNB3Q15768 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.03■□□□□ 0.64
EFNB3Q15768 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.03■□□□□ 0.64
EFNB3Q15768 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
EFNB3Q15768 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
EFNB3Q15768 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.02■□□□□ 0.64
EFNB3Q15768 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
EFNB3Q15768 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
EFNB3Q15768 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.02■□□□□ 0.63
EFNB3Q15768 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
EFNB3Q15768 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EFNB3Q15768 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.01■□□□□ 0.63
EFNB3Q15768 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EFNB3Q15768 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.01■□□□□ 0.63
EFNB3Q15768 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
EFNB3Q15768 SLC47A1P1-202ENST00000449666 945 ntBASIC19.01■□□□□ 0.63
EFNB3Q15768 OR2I1P-207ENST00000453522 948 ntBASIC19.01■□□□□ 0.63
EFNB3Q15768 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.01■□□□□ 0.63
EFNB3Q15768 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.01■□□□□ 0.63
EFNB3Q15768 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
EFNB3Q15768 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.01■□□□□ 0.63
EFNB3Q15768 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
EFNB3Q15768 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.01■□□□□ 0.63
EFNB3Q15768 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
EFNB3Q15768 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.01■□□□□ 0.63
EFNB3Q15768 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
EFNB3Q15768 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 GRAMD4P2-201ENST00000423297 1097 ntBASIC19■□□□□ 0.63
EFNB3Q15768 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
EFNB3Q15768 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19■□□□□ 0.63
EFNB3Q15768 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
EFNB3Q15768 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
EFNB3Q15768 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EFNB3Q15768 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.99■□□□□ 0.63
EFNB3Q15768 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EFNB3Q15768 IRS3P-201ENST00000223076 1006 ntBASIC18.99■□□□□ 0.63
EFNB3Q15768 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
EFNB3Q15768 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.99■□□□□ 0.63
EFNB3Q15768 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.99■□□□□ 0.63
EFNB3Q15768 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.99■□□□□ 0.63
EFNB3Q15768 AC126544.1-201ENST00000580842 1059 ntBASIC18.99■□□□□ 0.63
EFNB3Q15768 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EFNB3Q15768 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
EFNB3Q15768 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
EFNB3Q15768 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms