Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 LAS1YKR063C 1509 nt3.97□□□□□ -1.77
RRP40Q08285 WSS1YHR134W 810 nt3.97□□□□□ -1.77
RRP40Q08285 EFB1YAL003W 621 nt3.97□□□□□ -1.77
RRP40Q08285 RDN5-1RDN5-1 121 nt3.97□□□□□ -1.77
RRP40Q08285 YAR030CYAR030C 342 nt3.97□□□□□ -1.77
RRP40Q08285 RDN5-6RDN5-6 121 nt3.97□□□□□ -1.77
RRP40Q08285 AST1YBL069W 1290 nt3.97□□□□□ -1.77
RRP40Q08285 YCR023CYCR023C 1836 nt3.97□□□□□ -1.77
RRP40Q08285 PRP31YGR091W 1485 nt3.97□□□□□ -1.77
RRP40Q08285 DIP2YLR129W 2832 nt3.97□□□□□ -1.77
RRP40Q08285 RAD1YPL022W 3303 nt3.96□□□□□ -1.77
RRP40Q08285 TRM11YOL124C 1302 nt3.96□□□□□ -1.77
RRP40Q08285 YML020WYML020W 1995 nt3.96□□□□□ -1.77
RRP40Q08285 MCP2YLR253W 1710 nt3.96□□□□□ -1.78
RRP40Q08285 KIN2YLR096W 3444 nt3.96□□□□□ -1.78
RRP40Q08285 AIM7YDR063W 450 nt3.96□□□□□ -1.78
RRP40Q08285 YFT2YDR319C 825 nt3.96□□□□□ -1.78
RRP40Q08285 RAD27YKL113C 1149 nt3.96□□□□□ -1.78
RRP40Q08285 NOP13YNL175C 1212 nt3.96□□□□□ -1.78
RRP40Q08285 OMS1YDR316W 1416 nt3.95□□□□□ -1.78
RRP40Q08285 PMC1YGL006W 3522 nt3.95□□□□□ -1.78
RRP40Q08285 YPK9YOR291W 4419 nt3.95□□□□□ -1.78
RRP40Q08285 SPT3YDR392W 1014 nt3.95□□□□□ -1.78
RRP40Q08285 BUD25YER014C-A 462 nt3.95□□□□□ -1.78
RRP40Q08285 SRB5YGR104C 924 nt3.95□□□□□ -1.78
RRP40Q08285 YIL014C-AYIL014C-A 315 nt3.95□□□□□ -1.78
RRP40Q08285 YIR043CYIR043C 693 nt3.95□□□□□ -1.78
RRP40Q08285 RSA3YLR221C 663 nt3.95□□□□□ -1.78
RRP40Q08285 YOR131CYOR131C 657 nt3.95□□□□□ -1.78
RRP40Q08285 SPN1YPR133C 1233 nt3.95□□□□□ -1.78
RRP40Q08285 CYM1YDR430C 2970 nt3.95□□□□□ -1.78
RRP40Q08285 PTC1YDL006W 846 nt3.94□□□□□ -1.78
RRP40Q08285 SPR28YDR218C 1272 nt3.94□□□□□ -1.78
RRP40Q08285 PIC2YER053C 903 nt3.94□□□□□ -1.78
RRP40Q08285 RPL24AYGL031C 468 nt3.94□□□□□ -1.78
RRP40Q08285 MIC26YGR235C 702 nt3.94□□□□□ -1.78
RRP40Q08285 PXR1YGR280C 816 nt3.94□□□□□ -1.78
RRP40Q08285 RPS4BYHR203C 786 nt3.94□□□□□ -1.78
RRP40Q08285 RPS4AYJR145C 786 nt3.94□□□□□ -1.78
RRP40Q08285 YNL067W-AYNL067W-A 147 nt3.94□□□□□ -1.78
RRP40Q08285 YDC1YPL087W 954 nt3.94□□□□□ -1.78
RRP40Q08285 VPS69YPR087W 321 nt3.94□□□□□ -1.78
RRP40Q08285 DIT1YDR403W 1611 nt3.94□□□□□ -1.78
RRP40Q08285 PEX30YLR324W 1572 nt3.93□□□□□ -1.78
RRP40Q08285 MSK1YNL073W 1731 nt3.93□□□□□ -1.78
RRP40Q08285 TMA17YDL110C 453 nt3.93□□□□□ -1.78
RRP40Q08285 ENT5YDR153C 1236 nt3.93□□□□□ -1.78
RRP40Q08285 tL(UAG)JtL(UAG)J 82 nt3.93□□□□□ -1.78
RRP40Q08285 tL(UAG)L1tL(UAG)L1 82 nt3.93□□□□□ -1.78
RRP40Q08285 tL(UAG)L2tL(UAG)L2 82 nt3.93□□□□□ -1.78
RRP40Q08285 ORM2YLR350W 651 nt3.93□□□□□ -1.78
RRP40Q08285 HEK2YBL032W 1146 nt3.93□□□□□ -1.78
RRP40Q08285 YNL181WYNL181W 1224 nt3.93□□□□□ -1.78
RRP40Q08285 MAD3YJL013C 1548 nt3.93□□□□□ -1.78
RRP40Q08285 MTR10YOR160W 2919 nt3.93□□□□□ -1.78
RRP40Q08285 LYS2YBR115C 4179 nt3.93□□□□□ -1.78
RRP40Q08285 RPN6YDL097C 1305 nt3.93□□□□□ -1.78
RRP40Q08285 BBC1YJL020C 3474 nt3.93□□□□□ -1.78
RRP40Q08285 KCC4YCL024W 3114 nt3.92□□□□□ -1.78
RRP40Q08285 FLC1YPL221W 2382 nt3.92□□□□□ -1.78
RRP40Q08285 THI7YLR237W 1797 nt3.92□□□□□ -1.78
RRP40Q08285 RSC58YLR033W 1509 nt3.92□□□□□ -1.78
RRP40Q08285 THI13YDL244W 1023 nt3.92□□□□□ -1.78
RRP40Q08285 UBC1YDR177W 648 nt3.92□□□□□ -1.78
RRP40Q08285 YDR246W-AYDR246W-A 201 nt3.92□□□□□ -1.78
RRP40Q08285 TYS1YGR185C 1185 nt3.92□□□□□ -1.78
RRP40Q08285 BIO2YGR286C 1128 nt3.92□□□□□ -1.78
RRP40Q08285 THI11YJR156C 1023 nt3.92□□□□□ -1.78
RRP40Q08285 SUI1YNL244C 327 nt3.92□□□□□ -1.78
RRP40Q08285 CUS2YNL286W 858 nt3.92□□□□□ -1.78
RRP40Q08285 YPL025CYPL025C 558 nt3.92□□□□□ -1.78
RRP40Q08285 DSS4YPR017C 432 nt3.92□□□□□ -1.78
RRP40Q08285 TIP41YPR040W 1071 nt3.92□□□□□ -1.78
RRP40Q08285 PBN1YCL052C 1251 nt3.92□□□□□ -1.78
RRP40Q08285 TIP20YGL145W 2106 nt3.92□□□□□ -1.78
RRP40Q08285 VHS3YOR054C 2025 nt3.92□□□□□ -1.78
RRP40Q08285 ARH1YDR376W 1482 nt3.92□□□□□ -1.78
RRP40Q08285 YDR445CYDR445C 408 nt3.91□□□□□ -1.78
RRP40Q08285 YND1YER005W 1893 nt3.91□□□□□ -1.78
RRP40Q08285 YER134CYER134C 537 nt3.91□□□□□ -1.78
RRP40Q08285 AAD6YFL056C 639 nt3.91□□□□□ -1.78
RRP40Q08285 SPC105YGL093W 2754 nt3.91□□□□□ -1.78
RRP40Q08285 VID28YIL017C 2766 nt3.91□□□□□ -1.78
RRP40Q08285 FAR10YLR238W 1437 nt3.91□□□□□ -1.78
RRP40Q08285 SEC72YLR292C 582 nt3.91□□□□□ -1.78
RRP40Q08285 MRPL3YMR024W 1173 nt3.91□□□□□ -1.78
RRP40Q08285 ALG5YPL227C 1005 nt3.91□□□□□ -1.78
RRP40Q08285 YPR174CYPR174C 666 nt3.91□□□□□ -1.78
RRP40Q08285 SRB6YBR253W 366 nt3.91□□□□□ -1.78
RRP40Q08285 PIM1YBL022C 3402 nt3.91□□□□□ -1.78
RRP40Q08285 GPI18YBR004C 1302 nt3.91□□□□□ -1.78
RRP40Q08285 TCO89YPL180W 2400 nt3.9□□□□□ -1.78
RRP40Q08285 YPS7YDR349C 1791 nt3.9□□□□□ -1.79
RRP40Q08285 RPS11AYDR025W 471 nt3.9□□□□□ -1.79
RRP40Q08285 UBC8YEL012W 657 nt3.9□□□□□ -1.79
RRP40Q08285 GRE3YHR104W 984 nt3.9□□□□□ -1.79
RRP40Q08285 LNP1YHR192W 837 nt3.9□□□□□ -1.79
RRP40Q08285 RFU1YLR073C 603 nt3.9□□□□□ -1.79
RRP40Q08285 OCA1YNL099C 717 nt3.9□□□□□ -1.79
RRP40Q08285 SEO1YAL067C 1782 nt3.89□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms