Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
CFHR3Q02985 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CFHR3Q02985 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.46■□□□□ 0.39
CFHR3Q02985 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.46■□□□□ 0.39
CFHR3Q02985 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.46■□□□□ 0.39
CFHR3Q02985 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.46■□□□□ 0.39
CFHR3Q02985 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.46■□□□□ 0.39
CFHR3Q02985 MIR4767-201ENST00000582827 78 ntBASIC17.46■□□□□ 0.39
CFHR3Q02985 AL031432.3-201ENST00000607698 485 ntBASIC17.46■□□□□ 0.39
CFHR3Q02985 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CFHR3Q02985 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CFHR3Q02985 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CFHR3Q02985 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.45■□□□□ 0.38
CFHR3Q02985 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.45■□□□□ 0.38
CFHR3Q02985 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC17.45■□□□□ 0.38
CFHR3Q02985 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 ANOS2P-203ENST00000472227 1816 ntBASIC17.45■□□□□ 0.38
CFHR3Q02985 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 AC092068.2-201ENST00000590491 1708 ntBASIC17.45■□□□□ 0.38
CFHR3Q02985 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC17.45■□□□□ 0.38
CFHR3Q02985 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.45■□□□□ 0.38
CFHR3Q02985 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CFHR3Q02985 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CFHR3Q02985 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CFHR3Q02985 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.44■□□□□ 0.38
CFHR3Q02985 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.44■□□□□ 0.38
CFHR3Q02985 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 EDA-201ENST00000338901 1233 ntBASIC17.44■□□□□ 0.38
CFHR3Q02985 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC17.44■□□□□ 0.38
CFHR3Q02985 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.44■□□□□ 0.38
CFHR3Q02985 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.44■□□□□ 0.38
CFHR3Q02985 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CFHR3Q02985 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.44■□□□□ 0.38
CFHR3Q02985 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.43■□□□□ 0.38
CFHR3Q02985 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CFHR3Q02985 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 AC005837.3-201ENST00000612163 286 ntBASIC17.43■□□□□ 0.38
CFHR3Q02985 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.43■□□□□ 0.38
CFHR3Q02985 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFHR3Q02985 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CFHR3Q02985 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CFHR3Q02985 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.42■□□□□ 0.38
CFHR3Q02985 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 AL355001.2-201ENST00000620617 1191 ntBASIC17.42■□□□□ 0.38
CFHR3Q02985 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
CFHR3Q02985 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 AL353803.4-201ENST00000565882 1934 ntBASIC17.42■□□□□ 0.38
CFHR3Q02985 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFHR3Q02985 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.42■□□□□ 0.38
CFHR3Q02985 AC133637.1-201ENST00000624115 1537 ntBASIC17.42■□□□□ 0.38
CFHR3Q02985 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.41■□□□□ 0.38
CFHR3Q02985 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.41■□□□□ 0.38
CFHR3Q02985 SUDS3P1-201ENST00000505831 966 ntBASIC17.41■□□□□ 0.38
CFHR3Q02985 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.41■□□□□ 0.38
CFHR3Q02985 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFHR3Q02985 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CFHR3Q02985 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
CFHR3Q02985 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CFHR3Q02985 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CFHR3Q02985 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 AP001330.3-201ENST00000520123 633 ntBASIC17.4■□□□□ 0.38
CFHR3Q02985 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.4■□□□□ 0.38
CFHR3Q02985 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.4■□□□□ 0.38
CFHR3Q02985 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CFHR3Q02985 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.4■□□□□ 0.38
CFHR3Q02985 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.4■□□□□ 0.38
CFHR3Q02985 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFHR3Q02985 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.4■□□□□ 0.38
CFHR3Q02985 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms