Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HLA-DRB3P79483 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 AL353803.4-201ENST00000565882 1934 ntBASIC18.61■□□□□ 0.57
HLA-DRB3P79483 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HLA-DRB3P79483 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.6■□□□□ 0.57
HLA-DRB3P79483 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 YBX1P4-201ENST00000392794 808 ntBASIC18.59■□□□□ 0.57
HLA-DRB3P79483 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 AC103834.1-201ENST00000520383 144 ntBASIC18.59■□□□□ 0.57
HLA-DRB3P79483 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 AL033527.3-201ENST00000566366 1196 ntBASIC18.59■□□□□ 0.57
HLA-DRB3P79483 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HLA-DRB3P79483 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.58■□□□□ 0.57
HLA-DRB3P79483 KRT8P33-201ENST00000508125 1423 ntBASIC18.58■□□□□ 0.57
HLA-DRB3P79483 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HLA-DRB3P79483 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 AC103724.3-201ENST00000564481 992 ntBASIC18.58■□□□□ 0.56
HLA-DRB3P79483 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.58■□□□□ 0.56
HLA-DRB3P79483 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 AC127496.7-201ENST00000625110 1798 ntBASIC18.57■□□□□ 0.56
HLA-DRB3P79483 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.57■□□□□ 0.56
HLA-DRB3P79483 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 AC242852.2-201ENST00000615738 1807 ntBASIC18.56■□□□□ 0.56
HLA-DRB3P79483 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HLA-DRB3P79483 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms