Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
NKX6-1P78426 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX6-1P78426 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.54■□□□□ 0.72
NKX6-1P78426 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
NKX6-1P78426 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.54■□□□□ 0.72
NKX6-1P78426 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX6-1P78426 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-1P78426 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
NKX6-1P78426 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-1P78426 AC027682.1-201ENST00000562846 899 ntBASIC19.53■□□□□ 0.72
NKX6-1P78426 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.53■□□□□ 0.72
NKX6-1P78426 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.53■□□□□ 0.72
NKX6-1P78426 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-1P78426 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-1P78426 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
NKX6-1P78426 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX6-1P78426 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX6-1P78426 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
NKX6-1P78426 AC009102.2-201ENST00000606772 1639 ntBASIC19.52■□□□□ 0.72
NKX6-1P78426 IRS3P-201ENST00000223076 1006 ntBASIC19.52■□□□□ 0.72
NKX6-1P78426 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX6-1P78426 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NKX6-1P78426 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.52■□□□□ 0.72
NKX6-1P78426 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
NKX6-1P78426 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NKX6-1P78426 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
NKX6-1P78426 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.52■□□□□ 0.71
NKX6-1P78426 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NKX6-1P78426 AC133561.1-201ENST00000568600 2415 ntBASIC19.51■□□□□ 0.71
NKX6-1P78426 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
NKX6-1P78426 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NKX6-1P78426 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX6-1P78426 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.51■□□□□ 0.71
NKX6-1P78426 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
NKX6-1P78426 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NKX6-1P78426 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
NKX6-1P78426 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 AC008764.7-201ENST00000593779 1081 ntBASIC19.5■□□□□ 0.71
NKX6-1P78426 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.5■□□□□ 0.71
NKX6-1P78426 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
NKX6-1P78426 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NKX6-1P78426 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
NKX6-1P78426 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 SERBP1P1-201ENST00000396021 1160 ntBASIC19.49■□□□□ 0.71
NKX6-1P78426 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.49■□□□□ 0.71
NKX6-1P78426 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NKX6-1P78426 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NKX6-1P78426 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 AC004812.2-201ENST00000611079 2094 ntBASIC19.48■□□□□ 0.71
NKX6-1P78426 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NKX6-1P78426 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX6-1P78426 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NKX6-1P78426 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX6-1P78426 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.48■□□□□ 0.71
NKX6-1P78426 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.48■□□□□ 0.71
NKX6-1P78426 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NKX6-1P78426 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX6-1P78426 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
NKX6-1P78426 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.47■□□□□ 0.71
NKX6-1P78426 C17orf82-201ENST00000623772 1530 ntBASIC19.47■□□□□ 0.71
NKX6-1P78426 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.47■□□□□ 0.71
NKX6-1P78426 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
NKX6-1P78426 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX6-1P78426 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NKX6-1P78426 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX6-1P78426 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.47■□□□□ 0.71
NKX6-1P78426 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX6-1P78426 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NKX6-1P78426 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.46■□□□□ 0.71
NKX6-1P78426 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NKX6-1P78426 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NKX6-1P78426 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.46■□□□□ 0.71
NKX6-1P78426 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms