Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.03■□□□□ 0.96
RPP38P78345 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPP38P78345 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RPP38P78345 C1orf229-201ENST00000623686 2258 ntBASIC21.02■□□□□ 0.96
RPP38P78345 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.02■□□□□ 0.96
RPP38P78345 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPP38P78345 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.02■□□□□ 0.96
RPP38P78345 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPP38P78345 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPP38P78345 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPP38P78345 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPP38P78345 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RPP38P78345 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPP38P78345 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPP38P78345 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
RPP38P78345 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPP38P78345 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.01■□□□□ 0.95
RPP38P78345 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
RPP38P78345 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RPP38P78345 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RPP38P78345 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.01■□□□□ 0.95
RPP38P78345 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 DUSP8P3-201ENST00000399571 1760 ntBASIC21■□□□□ 0.95
RPP38P78345 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
RPP38P78345 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPP38P78345 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 AK3-203ENST00000447596 705 ntTSL 2 BASIC21■□□□□ 0.95
RPP38P78345 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21■□□□□ 0.95
RPP38P78345 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21■□□□□ 0.95
RPP38P78345 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21■□□□□ 0.95
RPP38P78345 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21■□□□□ 0.95
RPP38P78345 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21■□□□□ 0.95
RPP38P78345 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPP38P78345 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPP38P78345 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPP38P78345 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.99■□□□□ 0.95
RPP38P78345 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.99■□□□□ 0.95
RPP38P78345 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RPP38P78345 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPP38P78345 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.99■□□□□ 0.95
RPP38P78345 AC092068.2-201ENST00000590491 1708 ntBASIC20.98■□□□□ 0.95
RPP38P78345 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
RPP38P78345 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.98■□□□□ 0.95
RPP38P78345 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RPP38P78345 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.98■□□□□ 0.95
RPP38P78345 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.98■□□□□ 0.95
RPP38P78345 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RPP38P78345 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.97■□□□□ 0.95
RPP38P78345 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RPP38P78345 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.97■□□□□ 0.95
RPP38P78345 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.97■□□□□ 0.95
RPP38P78345 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RPP38P78345 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RPP38P78345 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
RPP38P78345 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
RPP38P78345 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.96■□□□□ 0.95
RPP38P78345 AL117332.1-201ENST00000622628 974 ntBASIC20.96■□□□□ 0.95
RPP38P78345 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.96■□□□□ 0.95
RPP38P78345 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.96■□□□□ 0.95
RPP38P78345 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RPP38P78345 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
RPP38P78345 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
RPP38P78345 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RPP38P78345 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPP38P78345 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPP38P78345 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RPP38P78345 MIR3621-201ENST00000580529 85 ntBASIC20.95■□□□□ 0.94
RPP38P78345 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.95■□□□□ 0.94
RPP38P78345 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.95■□□□□ 0.94
RPP38P78345 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms