Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.15■□□□□ 0.66
RPS27AP62979 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RPS27AP62979 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPS27AP62979 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RPS27AP62979 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RPS27AP62979 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.15■□□□□ 0.66
RPS27AP62979 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS27AP62979 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS27AP62979 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RPS27AP62979 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.14■□□□□ 0.65
RPS27AP62979 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS27AP62979 AC139795.1-202ENST00000500444 432 ntBASIC19.14■□□□□ 0.65
RPS27AP62979 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.14■□□□□ 0.65
RPS27AP62979 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RPS27AP62979 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPS27AP62979 AC079630.1-202ENST00000618127 1840 ntBASIC19.14■□□□□ 0.65
RPS27AP62979 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.13■□□□□ 0.65
RPS27AP62979 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.13■□□□□ 0.65
RPS27AP62979 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 ESRRAP2-201ENST00000418437 1549 ntBASIC19.13■□□□□ 0.65
RPS27AP62979 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.13■□□□□ 0.65
RPS27AP62979 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.13■□□□□ 0.65
RPS27AP62979 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RPS27AP62979 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
RPS27AP62979 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS27AP62979 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.12■□□□□ 0.65
RPS27AP62979 HSD17B1P1-201ENST00000590052 955 ntBASIC19.12■□□□□ 0.65
RPS27AP62979 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RPS27AP62979 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RPS27AP62979 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS27AP62979 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
RPS27AP62979 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS27AP62979 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 AC120024.1-201ENST00000562672 995 ntBASIC19.11■□□□□ 0.65
RPS27AP62979 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPS27AP62979 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RPS27AP62979 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RPS27AP62979 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RPS27AP62979 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.11■□□□□ 0.65
RPS27AP62979 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.1■□□□□ 0.65
RPS27AP62979 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RPS27AP62979 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.1■□□□□ 0.65
RPS27AP62979 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.1■□□□□ 0.65
RPS27AP62979 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.1■□□□□ 0.65
RPS27AP62979 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.1■□□□□ 0.65
RPS27AP62979 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RPS27AP62979 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.1■□□□□ 0.65
RPS27AP62979 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.09■□□□□ 0.65
RPS27AP62979 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.09■□□□□ 0.65
RPS27AP62979 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.09■□□□□ 0.65
RPS27AP62979 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS27AP62979 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS27AP62979 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS27AP62979 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS27AP62979 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
RPS27AP62979 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RPS27AP62979 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.09■□□□□ 0.65
RPS27AP62979 AF131216.4-201ENST00000638924 1588 ntBASIC19.09■□□□□ 0.65
RPS27AP62979 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
RPS27AP62979 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RPS27AP62979 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms