Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.38■□□□□ 0.85
CDC42P60953 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42P60953 AC092053.2-201ENST00000640557 1818 ntBASIC20.38■□□□□ 0.85
CDC42P60953 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CDC42P60953 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.37■□□□□ 0.85
CDC42P60953 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 AC079630.1-202ENST00000618127 1840 ntBASIC20.37■□□□□ 0.85
CDC42P60953 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
CDC42P60953 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDC42P60953 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CDC42P60953 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CDC42P60953 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDC42P60953 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.37■□□□□ 0.85
CDC42P60953 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42P60953 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42P60953 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDC42P60953 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.36■□□□□ 0.85
CDC42P60953 GPX1-201ENST00000419349 1106 ntBASIC20.36■□□□□ 0.85
CDC42P60953 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42P60953 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDC42P60953 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CDC42P60953 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42P60953 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.36■□□□□ 0.85
CDC42P60953 C11orf96-202ENST00000528572 1834 ntBASIC20.36■□□□□ 0.85
CDC42P60953 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42P60953 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.35■□□□□ 0.85
CDC42P60953 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.35■□□□□ 0.85
CDC42P60953 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 AC011551.1-201ENST00000614101 683 ntBASIC20.35■□□□□ 0.85
CDC42P60953 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CDC42P60953 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CDC42P60953 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.34■□□□□ 0.85
CDC42P60953 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CDC42P60953 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CDC42P60953 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42P60953 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42P60953 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.34■□□□□ 0.85
CDC42P60953 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CDC42P60953 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CDC42P60953 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42P60953 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42P60953 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CDC42P60953 MIR4449-201ENST00000578365 66 ntBASIC20.33■□□□□ 0.85
CDC42P60953 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CDC42P60953 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.33■□□□□ 0.84
CDC42P60953 AC139530.1-201ENST00000575312 1977 ntBASIC20.33■□□□□ 0.84
CDC42P60953 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDC42P60953 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CDC42P60953 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CDC42P60953 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.32■□□□□ 0.84
CDC42P60953 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.32■□□□□ 0.84
CDC42P60953 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CDC42P60953 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CDC42P60953 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CDC42P60953 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CDC42P60953 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.31■□□□□ 0.84
CDC42P60953 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CDC42P60953 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CDC42P60953 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.3■□□□□ 0.84
CDC42P60953 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms