Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
DEFA3P59666 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
DEFA3P59666 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
DEFA3P59666 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEFA3P59666 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEFA3P59666 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.63■□□□□ 0.73
DEFA3P59666 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEFA3P59666 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.62■□□□□ 0.73
DEFA3P59666 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.62■□□□□ 0.73
DEFA3P59666 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
DEFA3P59666 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC19.62■□□□□ 0.73
DEFA3P59666 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.62■□□□□ 0.73
DEFA3P59666 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
DEFA3P59666 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC19.61■□□□□ 0.73
DEFA3P59666 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 AC139530.1-201ENST00000575312 1977 ntBASIC19.61■□□□□ 0.73
DEFA3P59666 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
DEFA3P59666 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.61■□□□□ 0.73
DEFA3P59666 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
DEFA3P59666 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.61■□□□□ 0.73
DEFA3P59666 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.61■□□□□ 0.73
DEFA3P59666 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.61■□□□□ 0.73
DEFA3P59666 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.61■□□□□ 0.73
DEFA3P59666 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
DEFA3P59666 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
DEFA3P59666 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
DEFA3P59666 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.6■□□□□ 0.73
DEFA3P59666 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.6■□□□□ 0.73
DEFA3P59666 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
DEFA3P59666 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
DEFA3P59666 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DEFA3P59666 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DEFA3P59666 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DEFA3P59666 RARRES2P7-201ENST00000567349 469 ntBASIC19.59■□□□□ 0.73
DEFA3P59666 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
DEFA3P59666 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DEFA3P59666 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.73
DEFA3P59666 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DEFA3P59666 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
DEFA3P59666 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DEFA3P59666 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DEFA3P59666 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DEFA3P59666 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DEFA3P59666 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.58■□□□□ 0.72
DEFA3P59666 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.58■□□□□ 0.72
DEFA3P59666 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 AC138932.1-201ENST00000534164 6830 ntBASIC19.58■□□□□ 0.72
DEFA3P59666 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DEFA3P59666 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.72
DEFA3P59666 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DEFA3P59666 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
DEFA3P59666 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.57■□□□□ 0.72
DEFA3P59666 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.57■□□□□ 0.72
DEFA3P59666 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
DEFA3P59666 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
DEFA3P59666 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
DEFA3P59666 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.57■□□□□ 0.72
DEFA3P59666 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
DEFA3P59666 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DEFA3P59666 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA3P59666 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA3P59666 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA3P59666 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA3P59666 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DEFA3P59666 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms