Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 LINC00565-201ENST00000562710 2331 ntBASIC21.79■■□□□ 1.08
CDH13P55290 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CDH13P55290 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDH13P55290 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CDH13P55290 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH13P55290 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CDH13P55290 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CDH13P55290 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.78■■□□□ 1.08
CDH13P55290 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.78■■□□□ 1.08
CDH13P55290 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.78■■□□□ 1.08
CDH13P55290 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDH13P55290 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.78■■□□□ 1.08
CDH13P55290 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH13P55290 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.77■■□□□ 1.08
CDH13P55290 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDH13P55290 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDH13P55290 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CDH13P55290 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.77■■□□□ 1.08
CDH13P55290 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.77■■□□□ 1.07
CDH13P55290 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
CDH13P55290 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.76■■□□□ 1.07
CDH13P55290 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
CDH13P55290 LINC00526-201ENST00000581067 1875 ntBASIC21.76■■□□□ 1.07
CDH13P55290 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDH13P55290 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH13P55290 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.75■■□□□ 1.07
CDH13P55290 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH13P55290 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.75■■□□□ 1.07
CDH13P55290 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.75■■□□□ 1.07
CDH13P55290 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDH13P55290 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH13P55290 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH13P55290 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.74■■□□□ 1.07
CDH13P55290 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CDH13P55290 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CDH13P55290 AC144652.1-201ENST00000609974 1624 ntBASIC21.73■■□□□ 1.07
CDH13P55290 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CDH13P55290 ECEL1P1-201ENST00000373592 1742 ntBASIC21.73■■□□□ 1.07
CDH13P55290 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
CDH13P55290 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 AC021242.3-201ENST00000607598 1377 ntBASIC21.73■■□□□ 1.07
CDH13P55290 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CDH13P55290 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH13P55290 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC21.72■■□□□ 1.07
CDH13P55290 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH13P55290 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.72■■□□□ 1.07
CDH13P55290 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH13P55290 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms