Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH12P55289 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.75■□□□□ 0.91
CDH12P55289 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDH12P55289 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDH12P55289 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.75■□□□□ 0.91
CDH12P55289 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CDH12P55289 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CDH12P55289 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
CDH12P55289 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDH12P55289 KRT8P33-201ENST00000508125 1423 ntBASIC20.73■□□□□ 0.91
CDH12P55289 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.73■□□□□ 0.91
CDH12P55289 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.73■□□□□ 0.91
CDH12P55289 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 AC079630.1-202ENST00000618127 1840 ntBASIC20.73■□□□□ 0.91
CDH12P55289 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDH12P55289 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
CDH12P55289 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.72■□□□□ 0.91
CDH12P55289 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CDH12P55289 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDH12P55289 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH12P55289 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.71■□□□□ 0.91
CDH12P55289 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.71■□□□□ 0.91
CDH12P55289 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDH12P55289 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH12P55289 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH12P55289 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH12P55289 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDH12P55289 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDH12P55289 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH12P55289 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.71■□□□□ 0.91
CDH12P55289 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CDH12P55289 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 AC004448.1-201ENST00000458332 883 ntBASIC20.7■□□□□ 0.9
CDH12P55289 AC103724.3-201ENST00000564481 992 ntBASIC20.7■□□□□ 0.9
CDH12P55289 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDH12P55289 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDH12P55289 AC242852.2-201ENST00000615738 1807 ntBASIC20.69■□□□□ 0.9
CDH12P55289 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH12P55289 YBX1P4-201ENST00000392794 808 ntBASIC20.69■□□□□ 0.9
CDH12P55289 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDH12P55289 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH12P55289 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CDH12P55289 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDH12P55289 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
CDH12P55289 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH12P55289 ESRRAP2-201ENST00000418437 1549 ntBASIC20.68■□□□□ 0.9
CDH12P55289 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CDH12P55289 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.68■□□□□ 0.9
CDH12P55289 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.68■□□□□ 0.9
CDH12P55289 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH12P55289 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDH12P55289 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDH12P55289 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDH12P55289 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CDH12P55289 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.68■□□□□ 0.9
CDH12P55289 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CDH12P55289 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH12P55289 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.67■□□□□ 0.9
CDH12P55289 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDH12P55289 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDH12P55289 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.67■□□□□ 0.9
CDH12P55289 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.67■□□□□ 0.9
CDH12P55289 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDH12P55289 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDH12P55289 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDH12P55289 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms