Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.88■■□□□ 1.41
CDH8P55286 DUX4L4-201ENST00000566884 1269 ntBASIC23.88■■□□□ 1.41
CDH8P55286 AC110285.6-201ENST00000617652 491 ntBASIC23.88■■□□□ 1.41
CDH8P55286 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CDH8P55286 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CDH8P55286 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.87■■□□□ 1.41
CDH8P55286 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 SYT6-210ENST00000641643 1587 ntBASIC23.87■■□□□ 1.41
CDH8P55286 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CDH8P55286 SERBP1P1-201ENST00000396021 1160 ntBASIC23.87■■□□□ 1.41
CDH8P55286 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CDH8P55286 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC23.86■■□□□ 1.41
CDH8P55286 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.86■■□□□ 1.41
CDH8P55286 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.86■■□□□ 1.41
CDH8P55286 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 MIR3181-201ENST00000578512 73 ntBASIC23.86■■□□□ 1.41
CDH8P55286 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
CDH8P55286 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.85■■□□□ 1.41
CDH8P55286 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
CDH8P55286 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.85■■□□□ 1.41
CDH8P55286 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH8P55286 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH8P55286 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
CDH8P55286 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.85■■□□□ 1.41
CDH8P55286 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH8P55286 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.85■■□□□ 1.41
CDH8P55286 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
CDH8P55286 pRNA.6-201ENST00000610482 90 ntBASIC23.85■■□□□ 1.41
CDH8P55286 pRNA.5-201ENST00000612139 90 ntBASIC23.85■■□□□ 1.41
CDH8P55286 pRNA.11-201ENST00000618423 90 ntBASIC23.85■■□□□ 1.41
CDH8P55286 pRNA.13-201ENST00000619112 90 ntBASIC23.85■■□□□ 1.41
CDH8P55286 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.85■■□□□ 1.41
CDH8P55286 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.85■■□□□ 1.41
CDH8P55286 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CDH8P55286 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.84■■□□□ 1.41
CDH8P55286 AC092171.4-201ENST00000609130 632 ntBASIC23.84■■□□□ 1.41
CDH8P55286 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CDH8P55286 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH8P55286 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CDH8P55286 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH8P55286 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.83■■□□□ 1.41
CDH8P55286 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CDH8P55286 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CDH8P55286 DUX4L19-201ENST00000557448 1267 ntBASIC23.83■■□□□ 1.41
CDH8P55286 AL136162.1-201ENST00000607711 1078 ntBASIC23.83■■□□□ 1.41
CDH8P55286 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.83■■□□□ 1.41
CDH8P55286 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.83■■□□□ 1.41
CDH8P55286 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CDH8P55286 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.83■■□□□ 1.4
CDH8P55286 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.83■■□□□ 1.4
CDH8P55286 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
CDH8P55286 AC024257.2-201ENST00000549699 147 ntBASIC23.82■■□□□ 1.4
CDH8P55286 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.82■■□□□ 1.4
CDH8P55286 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH8P55286 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CDH8P55286 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDH8P55286 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH8P55286 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH8P55286 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH8P55286 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CDH8P55286 PBX2P1-201ENST00000493219 1291 ntBASIC23.81■■□□□ 1.4
CDH8P55286 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH8P55286 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDH8P55286 AL139246.5-201ENST00000606645 996 ntBASIC23.81■■□□□ 1.4
CDH8P55286 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.81■■□□□ 1.4
CDH8P55286 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.81■■□□□ 1.4
CDH8P55286 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDH8P55286 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH8P55286 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH8P55286 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH8P55286 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDH8P55286 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CDH8P55286 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CDH8P55286 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH8P55286 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH8P55286 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH8P55286 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CDH8P55286 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH8P55286 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.79■■□□□ 1.4
CDH8P55286 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH8P55286 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDH8P55286 DUSP8P3-201ENST00000399571 1760 ntBASIC23.79■■□□□ 1.4
CDH8P55286 HES6-206ENST00000409574 738 ntTSL 2 BASIC23.79■■□□□ 1.4
CDH8P55286 AL499627.2-201ENST00000606283 725 ntBASIC23.79■■□□□ 1.4
CDH8P55286 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms