Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
PRRX1P54821 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.29■□□□□ 0.52
PRRX1P54821 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.29■□□□□ 0.52
PRRX1P54821 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.29■□□□□ 0.52
PRRX1P54821 AC144652.1-201ENST00000609974 1624 ntBASIC18.29■□□□□ 0.52
PRRX1P54821 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRRX1P54821 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.28■□□□□ 0.52
PRRX1P54821 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.28■□□□□ 0.52
PRRX1P54821 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.28■□□□□ 0.52
PRRX1P54821 AC079630.1-202ENST00000618127 1840 ntBASIC18.28■□□□□ 0.52
PRRX1P54821 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRRX1P54821 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
PRRX1P54821 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PRRX1P54821 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.27■□□□□ 0.52
PRRX1P54821 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.27■□□□□ 0.52
PRRX1P54821 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PRRX1P54821 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
PRRX1P54821 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRRX1P54821 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
PRRX1P54821 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PRRX1P54821 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PRRX1P54821 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
PRRX1P54821 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.26■□□□□ 0.51
PRRX1P54821 DUSP8P5-201ENST00000422884 1815 ntBASIC18.26■□□□□ 0.51
PRRX1P54821 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.26■□□□□ 0.51
PRRX1P54821 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.26■□□□□ 0.51
PRRX1P54821 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.26■□□□□ 0.51
PRRX1P54821 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.26■□□□□ 0.51
PRRX1P54821 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.26■□□□□ 0.51
PRRX1P54821 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 LINC01529-204ENST00000636474 1715 ntBASIC18.26■□□□□ 0.51
PRRX1P54821 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PRRX1P54821 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.25■□□□□ 0.51
PRRX1P54821 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.25■□□□□ 0.51
PRRX1P54821 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
PRRX1P54821 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.25■□□□□ 0.51
PRRX1P54821 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.25■□□□□ 0.51
PRRX1P54821 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRRX1P54821 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.25■□□□□ 0.51
PRRX1P54821 AC131212.1-201ENST00000613771 668 ntBASIC18.25■□□□□ 0.51
PRRX1P54821 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.25■□□□□ 0.51
PRRX1P54821 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRRX1P54821 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
PRRX1P54821 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.25■□□□□ 0.51
PRRX1P54821 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PRRX1P54821 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 C17orf82-201ENST00000623772 1530 ntBASIC18.24■□□□□ 0.51
PRRX1P54821 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.24■□□□□ 0.51
PRRX1P54821 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PRRX1P54821 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.24■□□□□ 0.51
PRRX1P54821 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.24■□□□□ 0.51
PRRX1P54821 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.24■□□□□ 0.51
PRRX1P54821 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.24■□□□□ 0.51
PRRX1P54821 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.24■□□□□ 0.51
PRRX1P54821 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.24■□□□□ 0.51
PRRX1P54821 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PRRX1P54821 AC241377.3-202ENST00000626088 1088 ntBASIC18.24■□□□□ 0.51
PRRX1P54821 AC241585.3-202ENST00000628937 1088 ntBASIC18.24■□□□□ 0.51
PRRX1P54821 AC245100.8-202ENST00000629247 1058 ntBASIC18.24■□□□□ 0.51
PRRX1P54821 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms