Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP1B3P54709 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP1B3P54709 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP1B3P54709 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP1B3P54709 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP1B3P54709 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP1B3P54709 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.27■□□□□ 0.68
ATP1B3P54709 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP1B3P54709 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP1B3P54709 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP1B3P54709 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP1B3P54709 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP1B3P54709 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP1B3P54709 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.27■□□□□ 0.67
ATP1B3P54709 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP1B3P54709 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP1B3P54709 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP1B3P54709 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP1B3P54709 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP1B3P54709 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP1B3P54709 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP1B3P54709 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP1B3P54709 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP1B3P54709 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP1B3P54709 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 AL024507.2-201ENST00000606070 2574 ntBASIC19.25■□□□□ 0.67
ATP1B3P54709 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP1B3P54709 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP1B3P54709 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP1B3P54709 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP1B3P54709 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ATP1B3P54709 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP1B3P54709 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP1B3P54709 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP1B3P54709 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP1B3P54709 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP1B3P54709 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
ATP1B3P54709 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ATP1B3P54709 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP1B3P54709 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP1B3P54709 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATP1B3P54709 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.24■□□□□ 0.67
ATP1B3P54709 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP1B3P54709 AC137630.3-201ENST00000607245 391 ntBASIC19.24■□□□□ 0.67
ATP1B3P54709 AL031848.2-201ENST00000607670 837 ntBASIC19.24■□□□□ 0.67
ATP1B3P54709 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP1B3P54709 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP1B3P54709 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP1B3P54709 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP1B3P54709 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 AC079630.1-202ENST00000618127 1840 ntBASIC19.23■□□□□ 0.67
ATP1B3P54709 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
ATP1B3P54709 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATP1B3P54709 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
ATP1B3P54709 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
ATP1B3P54709 SNX5-217ENST00000606557 1087 ntBASIC19.23■□□□□ 0.67
ATP1B3P54709 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.23■□□□□ 0.67
ATP1B3P54709 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.23■□□□□ 0.67
ATP1B3P54709 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ATP1B3P54709 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATP1B3P54709 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATP1B3P54709 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP1B3P54709 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP1B3P54709 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP1B3P54709 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.22■□□□□ 0.67
ATP1B3P54709 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.22■□□□□ 0.67
ATP1B3P54709 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP1B3P54709 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATP1B3P54709 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
ATP1B3P54709 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.22■□□□□ 0.67
ATP1B3P54709 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATP1B3P54709 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ATP1B3P54709 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATP1B3P54709 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATP1B3P54709 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATP1B3P54709 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms