Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SSR4P51571 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR4P51571 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.52■□□□□ 0.88
SSR4P51571 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.52■□□□□ 0.88
SSR4P51571 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR4P51571 AC233992.3-201ENST00000607491 485 ntBASIC20.52■□□□□ 0.88
SSR4P51571 CA15P2-201ENST00000611168 834 ntBASIC20.52■□□□□ 0.88
SSR4P51571 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR4P51571 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR4P51571 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SSR4P51571 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSR4P51571 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSR4P51571 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SSR4P51571 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR4P51571 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.51■□□□□ 0.87
SSR4P51571 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 AC099791.1-201ENST00000416440 715 ntBASIC20.51■□□□□ 0.87
SSR4P51571 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.51■□□□□ 0.87
SSR4P51571 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SSR4P51571 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR4P51571 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SSR4P51571 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR4P51571 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.5■□□□□ 0.87
SSR4P51571 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR4P51571 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.5■□□□□ 0.87
SSR4P51571 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.5■□□□□ 0.87
SSR4P51571 AC105265.2-201ENST00000467189 838 ntBASIC20.5■□□□□ 0.87
SSR4P51571 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR4P51571 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR4P51571 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR4P51571 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SSR4P51571 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR4P51571 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 MIR935-201ENST00000401179 91 ntBASIC20.49■□□□□ 0.87
SSR4P51571 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.49■□□□□ 0.87
SSR4P51571 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR4P51571 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
SSR4P51571 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR4P51571 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SSR4P51571 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR4P51571 ZNRF2P3-201ENST00000424200 374 ntBASIC20.48■□□□□ 0.87
SSR4P51571 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.48■□□□□ 0.87
SSR4P51571 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.48■□□□□ 0.87
SSR4P51571 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SSR4P51571 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.48■□□□□ 0.87
SSR4P51571 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.47■□□□□ 0.87
SSR4P51571 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SSR4P51571 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
SSR4P51571 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SSR4P51571 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR4P51571 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR4P51571 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR4P51571 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.46■□□□□ 0.87
SSR4P51571 SLC47A1P1-202ENST00000449666 945 ntBASIC20.46■□□□□ 0.87
SSR4P51571 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.46■□□□□ 0.87
SSR4P51571 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.46■□□□□ 0.87
SSR4P51571 AC126544.1-201ENST00000580842 1059 ntBASIC20.46■□□□□ 0.87
SSR4P51571 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.46■□□□□ 0.87
SSR4P51571 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SSR4P51571 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SSR4P51571 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.87
SSR4P51571 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SSR4P51571 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR4P51571 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SSR4P51571 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSR4P51571 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.45■□□□□ 0.86
SSR4P51571 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.45■□□□□ 0.86
SSR4P51571 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.45■□□□□ 0.86
SSR4P51571 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.45■□□□□ 0.86
SSR4P51571 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms